documentation for v1.0

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@ -139,7 +139,7 @@ $(document).ready(function(){initNavTree('AdamsBashforth5_8cpp_source.html','');
<div class="line"><a name="l00032"></a><span class="lineno"> 32</span>&#160;:</div>
<div class="line"><a name="l00033"></a><span class="lineno"> 33</span>&#160; <a class="code" href="classpFlow_1_1integration.html">integration</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>, owner, <a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>, method),</div>
<div class="line"><a name="l00034"></a><span class="lineno"> 34</span>&#160; history_(</div>
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span>&#160; owner.<a class="code" href="classpFlow_1_1repository.html#a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4">emplaceObject</a>&lt;<a class="code" href="classpFlow_1_1pointField.html">pointField&lt;VectorSingle,AB5History&gt;</a>&gt;(</div>
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span>&#160; owner.emplaceObject&lt;<a class="code" href="classpFlow_1_1pointField.html">pointField&lt;VectorSingle,AB5History&gt;</a>&gt;(</div>
<div class="line"><a name="l00036"></a><span class="lineno"> 36</span>&#160; <a class="code" href="classpFlow_1_1objectFile.html">objectFile</a>(</div>
<div class="line"><a name="l00037"></a><span class="lineno"> 37</span>&#160; <a class="code" href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">groupNames</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>,<span class="stringliteral">&quot;AB5History&quot;</span>),</div>
<div class="line"><a name="l00038"></a><span class="lineno"> 38</span>&#160; <span class="stringliteral">&quot;&quot;</span>,</div>
@ -194,11 +194,11 @@ $(document).ready(function(){initNavTree('AdamsBashforth5_8cpp_source.html','');
<div class="line"><a name="l00087"></a><span class="lineno"> 87</span>&#160; <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
<div class="line"><a name="l00088"></a><span class="lineno"> 88</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
<div class="line"><a name="l00089"></a><span class="lineno"> 89</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
<div class="line"><a name="l00090"></a><span class="lineno"> 90</span>&#160; <a class="code" href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">range</a> activeRng)</div>
<div class="line"><a name="l00090"></a><span class="lineno"> 90</span>&#160; range activeRng)</div>
<div class="line"><a name="l00091"></a><span class="lineno"> 91</span>&#160;{</div>
<div class="line"><a name="l00092"></a><span class="lineno"> 92</span>&#160; <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
<div class="line"><a name="l00093"></a><span class="lineno"> 93</span>&#160; <span class="keyword">auto</span> d_y = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
<div class="line"><a name="l00094"></a><span class="lineno"> 94</span>&#160; <span class="keyword">auto</span> d_history = history_.deviceVectorAll();</div>
<div class="line"><a name="l00092"></a><span class="lineno"> 92</span>&#160; <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
<div class="line"><a name="l00093"></a><span class="lineno"> 93</span>&#160; <span class="keyword">auto</span> d_y = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
<div class="line"><a name="l00094"></a><span class="lineno"> 94</span>&#160; <span class="keyword">auto</span> d_history = history_.deviceViewAll();</div>
<div class="line"><a name="l00095"></a><span class="lineno"> 95</span>&#160; </div>
<div class="line"><a name="l00096"></a><span class="lineno"> 96</span>&#160; Kokkos::parallel_for(</div>
<div class="line"><a name="l00097"></a><span class="lineno"> 97</span>&#160; <span class="stringliteral">&quot;AdamsBashforth5::correct&quot;</span>,</div>
@ -219,34 +219,32 @@ $(document).ready(function(){initNavTree('AdamsBashforth5_8cpp_source.html','');
<div class="line"><a name="l00112"></a><span class="lineno"> 112</span>&#160;}</div>
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<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00046">builtinTypes.hpp:46</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a304d8581876270871949bf5d4755036a"><div class="ttname"><a href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">pFlow::range</a></div><div class="ttdeci">kRange&lt; int &gt; range</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00059">KokkosTypes.hpp:59</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
<div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a129b1fb5fcc9dfcc9c803d8b13758cbc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a129b1fb5fcc9dfcc9c803d8b13758cbc">pFlow::AdamsBashforth5::AdamsBashforth5</a></div><div class="ttdeci">AdamsBashforth5(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00026">AdamsBashforth5.cpp:26</a></div></div>
<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00049">integration.hpp:49</a></div></div>
<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth5::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00079">AdamsBashforth5.cpp:79</a></div></div>
<div class="ttc" id="aAdamsBashforth5_8hpp_html"><div class="ttname"><a href="AdamsBashforth5_8hpp.html">AdamsBashforth5.hpp</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00063">builtinTypes.hpp:63</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00097">types.hpp:97</a></div></div>
<div class="ttc" id="aclasspFlow_1_1repository_html_a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4"><div class="ttname"><a href="classpFlow_1_1repository.html#a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4">pFlow::repository::emplaceObject</a></div><div class="ttdeci">T &amp; emplaceObject(const objectFile &amp;objf, Args &amp;&amp;... args)</div><div class="ttdef"><b>Definition:</b> <a href="repositoryTemplates_8cpp_source.html#l00038">repositoryTemplates.cpp:38</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00156">bTypesFunctions.cpp:156</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00137">types.hpp:137</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdoc">Find the base in a group separated by &quot;.&quot; and return it.</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00185">bTypesFunctions.cpp:185</a></div></div>
<div class="ttc" id="astructpFlow_1_1AB5History_html"><div class="ttname"><a href="structpFlow_1_1AB5History.html">pFlow::AB5History</a></div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8hpp_source.html#l00031">AdamsBashforth5.hpp:31</a></div></div>
<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00035">pointField.hpp:35</a></div></div>
<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00044">pointStructure.hpp:44</a></div></div>
<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth5::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00086">AdamsBashforth5.cpp:86</a></div></div>
<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00053">builtinTypes.hpp:53</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth5::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdoc">Correction/main integration step.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00060">AdamsBashforth5.cpp:60</a></div></div>
<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00047">VectorSingle.hpp:47</a></div></div>
<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00033">objectFile.hpp:33</a></div></div>
<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00050">builtinTypes.hpp:50</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth5::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00060">AdamsBashforth5.cpp:60</a></div></div>
<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00030">objectFile.hpp:30</a></div></div>
<div class="ttc" id="asetPointStructure_8hpp_html_a385e32971df44b131e4498181a949a91"><div class="ttname"><a href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a></div><div class="ttdeci">auto &amp; pStruct</div><div class="ttdef"><b>Definition:</b> <a href="setPointStructure_8hpp_source.html#l00024">setPointStructure.hpp:24</a></div></div>
<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00054">pFlowMacros.hpp:54</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a12b4d93aa9730629403d73e84386bff5"><div class="ttname"><a href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">pFlow::groupNames</a></div><div class="ttdeci">word groupNames(const word &amp;bw, const word &amp;tw, char sep='.')</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00151">bTypesFunctions.cpp:151</a></div></div>
<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a51122b76468e0c5f19ea69c5c0ca6cf4"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">pFlow::VectorSingle::deviceViewAll</a></div><div class="ttdeci">INLINE_FUNCTION_H auto &amp; deviceViewAll()</div><div class="ttdoc">Device view range [0,capcity)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00249">VectorSingle.cpp:249</a></div></div>
<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00058">pFlowMacros.hpp:58</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a12b4d93aa9730629403d73e84386bff5"><div class="ttname"><a href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">pFlow::groupNames</a></div><div class="ttdeci">word groupNames(const word &amp;bw, const word &amp;tw, char sep='.')</div><div class="ttdoc">Group words and output bw.tw.</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00179">bTypesFunctions.cpp:179</a></div></div>
<div class="ttc" id="aclasspFlow_1_1repository_html"><div class="ttname"><a href="classpFlow_1_1repository.html">pFlow::repository</a></div><div class="ttdef"><b>Definition:</b> <a href="repository_8hpp_source.html#l00034">repository.hpp:34</a></div></div>
<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a18052bc1ad8ea07ea5b6205321cba10e"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">pFlow::VectorSingle::deviceVectorAll</a></div><div class="ttdeci">INLINE_FUNCTION_H viewType &amp; deviceVectorAll()</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00297">VectorSingle.hpp:297</a></div></div>
<div class="ttc" id="aclasspFlow_1_1Vector_html"><div class="ttname"><a href="classpFlow_1_1Vector.html">pFlow::Vector&lt; realx3 &gt;</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsBashforth5::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8hpp_source.html#l00093">AdamsBashforth5.hpp:93</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_afb1938bc6cfc199cbd70f224040d4afc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth5::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3Vector_D &amp;UNUSED(y), realx3Vector_D &amp;UNUSED(dy)) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00049">AdamsBashforth5.cpp:49</a></div></div>
<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer&lt; int32 &gt;</a></div></div>
<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer</a></div><div class="ttdoc">It holds two vectors of indecis on Host and Device.</div><div class="ttdef"><b>Definition:</b> <a href="indexContainer_8hpp_source.html#l00039">indexContainer.hpp:39</a></div></div>
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