From 0d24f5a3c1d642b2375ba9443f7627645d2565ee Mon Sep 17 00:00:00 2001
From: Hamidreza Norouzi <hamid.r.norouzi@gmail.com>
Date: Sun, 26 Mar 2023 00:13:53 -0700
Subject: [PATCH] features added

---
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+<h3>entities &rarr; multiRotatingAxisMotion Relation</h3><table class="dirtab"><tr class="dirtab"><th class="dirtab">File in src/MotionModel/entities</th><th class="dirtab">Includes file in src/MotionModel/multiRotatingAxisMotion</th></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_7944000ec3aee9d6b5bc9e95e5603559.html">multiRotatingAxis</a>&#160;/&#160;<a class="el" href="multiRotatingAxis_8cpp.html">multiRotatingAxis.cpp</a></td><td class="dirtab"><a class="el" href="multiRotatingAxisMotion_8hpp.html">multiRotatingAxisMotion.hpp</a></td></tr></table></div><!-- contents -->
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+<h3>Particles &rarr; Property Relation</h3><table class="dirtab"><tr class="dirtab"><th class="dirtab">File in src/Particles</th><th class="dirtab">Includes file in src/Property</th></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_ae10a04c09150cad5fefedcb2d995fdc.html">SphereParticles</a>&#160;/&#160;<a class="el" href="dir_d29baab380f019e44de3923e8a891c5f.html">sphereParticles</a>&#160;/&#160;<a class="el" href="sphereParticles_8hpp.html">sphereParticles.hpp</a></td><td class="dirtab"><a class="el" href="property_8hpp.html">property.hpp</a></td></tr></table></div><!-- contents -->
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+<h3>containers &rarr; typeSelection Relation</h3><table class="dirtab"><tr class="dirtab"><th class="dirtab">File in src/phasicFlow/containers</th><th class="dirtab">Includes file in src/phasicFlow/typeSelection</th></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_d599344b708ddccc0ade592fdb50618a.html">Map</a>&#160;/&#160;<a class="el" href="dir_9f8b50e6d9903705cf4c92f860cb8e50.html">hashMap</a>&#160;/&#160;<a class="el" href="hashMap_8hpp.html">hashMap.hpp</a></td><td class="dirtab"><a class="el" href="typeInfo_8hpp.html">typeInfo.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_0188d416f4dc3fe2d73e6709e73f243f.html">List</a>&#160;/&#160;<a class="el" href="dir_54572642b19a45e8c6ab7089112e8146.html">List</a>&#160;/&#160;<a class="el" href="List_8hpp.html">List.hpp</a></td><td class="dirtab"><a class="el" href="typeInfo_8hpp.html">typeInfo.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_d67f442c583c169126a33cc02f90b170.html">symArrayHD</a>&#160;/&#160;<a class="el" href="symArrayHD_8hpp.html">symArrayHD.hpp</a></td><td class="dirtab"><a class="el" href="typeInfo_8hpp.html">typeInfo.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_c06362741ee20f2df47d4d66ada3d48c.html">Vector</a>&#160;/&#160;<a class="el" href="Vector_8hpp.html">Vector.hpp</a></td><td class="dirtab"><a class="el" href="typeInfo_8hpp.html">typeInfo.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_6e5937d7e5e1e467a126da306e3d0a5a.html">VectorHD</a>&#160;/&#160;<a class="el" href="VectorDual_8hpp.html">VectorDual.hpp</a></td><td class="dirtab"><a class="el" href="typeInfo_8hpp.html">typeInfo.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_6e5937d7e5e1e467a126da306e3d0a5a.html">VectorHD</a>&#160;/&#160;<a class="el" href="VectorSingle_8hpp.html">VectorSingle.hpp</a></td><td class="dirtab"><a class="el" href="typeInfo_8hpp.html">typeInfo.hpp</a></td></tr></table></div><!-- contents -->
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+<h3>peakableRegion &rarr; cylinderRegion Relation</h3><table class="dirtab"><tr class="dirtab"><th class="dirtab">File in src/phasicFlow/structuredData/peakableRegion</th><th class="dirtab">Includes file in src/phasicFlow/structuredData/peakableRegion/cylinderRegion</th></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="peakableRegionInstantiate_8cpp.html">peakableRegionInstantiate.cpp</a></td><td class="dirtab"><a class="el" href="cylinderRegion_8hpp.html">cylinderRegion.hpp</a></td></tr></table></div><!-- contents -->
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+<h3>sphereRegion &rarr; dictionary Relation</h3><table class="dirtab"><tr class="dirtab"><th class="dirtab">File in src/phasicFlow/structuredData/peakableRegion/sphereRegion</th><th class="dirtab">Includes file in src/phasicFlow/dictionary</th></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="sphereRegion_8cpp.html">sphereRegion.cpp</a></td><td class="dirtab"><a class="el" href="dictionary_8hpp.html">dictionary.hpp</a></td></tr></table></div><!-- contents -->
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+<h3>utilities &rarr; src Relation</h3><table class="dirtab"><tr class="dirtab"><th class="dirtab">File in utilities</th><th class="dirtab">Includes file in src</th></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_3c3d08f815dabd43c45a477cf8ee74da.html">checkPhasicFlow</a>&#160;/&#160;<a class="el" href="checkPhasicFlow_8cpp.html">checkPhasicFlow.cpp</a></td><td class="dirtab"><a class="el" href="dir_8d255b47af8e1044c4e2364257c8fb8f.html">setHelpers</a>&#160;/&#160;<a class="el" href="finalize_8hpp.html">finalize.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="dir_3c3d08f815dabd43c45a477cf8ee74da.html">checkPhasicFlow</a>&#160;/&#160;<a class="el" href="checkPhasicFlow_8cpp.html">checkPhasicFlow.cpp</a></td><td class="dirtab"><a class="el" href="dir_8d255b47af8e1044c4e2364257c8fb8f.html">setHelpers</a>&#160;/&#160;<a class="el" href="initialize_8hpp.html">initialize.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" 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+<h3>vtkFile &rarr; src Relation</h3><table class="dirtab"><tr class="dirtab"><th class="dirtab">File in utilities/Utilities/vtkFile</th><th class="dirtab">Includes file in src</th></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="vtkFile_8hpp.html">vtkFile.hpp</a></td><td class="dirtab"><a class="el" href="dir_cd7a5046d028e114fc17b2ebc2bd02d2.html">phasicFlow</a>&#160;/&#160;<a class="el" href="dir_f0792bbf1949bfb891fb576079464319.html">fileSystem</a>&#160;/&#160;<a class="el" href="fileSystem_8hpp.html">fileSystem.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="vtkFile_8hpp.html">vtkFile.hpp</a></td><td class="dirtab"><a class="el" href="dir_cd7a5046d028e114fc17b2ebc2bd02d2.html">phasicFlow</a>&#160;/&#160;<a class="el" href="dir_b13948a90891cb8a59f39ab8c50a8102.html">streams</a>&#160;/&#160;<a class="el" href="streams_8hpp.html">streams.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="vtkFile_8hpp.html">vtkFile.hpp</a></td><td class="dirtab"><a class="el" href="dir_cd7a5046d028e114fc17b2ebc2bd02d2.html">phasicFlow</a>&#160;/&#160;<a class="el" href="dir_e8baec020e471dff3bc06b812491e6c5.html">types</a>&#160;/&#160;<a class="el" href="types_8hpp.html">types.hpp</a></td></tr><tr class="dirtab"><td class="dirtab"><a class="el" href="vtkFile_8hpp.html">vtkFile.hpp</a></td><td class="dirtab"><a class="el" href="dir_cd7a5046d028e114fc17b2ebc2bd02d2.html">phasicFlow</a>&#160;/&#160;<a class="el" href="dir_40d84a547212027edc83c31468d15508.html">smartPointers</a>&#160;/&#160;<a class="el" href="uniquePtr_8hpp.html">uniquePtr.hpp</a></td></tr></table></div><!-- contents -->
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  It solves the Newton's second law of motion and Euler's second law of motion for the translational and rotational motion of spherical particles. The code is not restricted to a specifict geometry or wall motion. It is designed in a way that additional features can be added to the code very easily.</p>
 <h2>Explore more</h2>
 <ul>
-<li><a href="https://github.com/PhasicFlow/phasicFlow/wiki/Features-of-PhasicFlow">Features of PhasicFlow</a></li>
+<li><a class="el" href="phasicFlowFeatures.html">Features of PhasicFlow</a></li>
 <li><a href="https://github.com/PhasicFlow/phasicFlow/wiki/How-to-Build-PhasicFlow">How to build PhasicFlow</a></li>
 <li>How to setup and run granular flow simulations</li>
 <li><a href="https://github.com/PhasicFlow/phasicFlow/wiki/Performance-of-phasicFlow">Benchmarks and performance tests</a> </li>
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-<div class="textblock"><h1>General representation of walls</h1>
-<h1>Various contact force models</h1>
-<h1>High precision integeration methods</h1>
+<div class="textblock"><h1>Preprocessing tools</h1>
+<p>Preprocessing tools are used to facilitate the process of case setup. They include tools for defining initial state of particles and geometry conversion.</p><ul>
+<li><b>particlesPhasicFlow</b> tool can be used to define the initial position of particles (for example at t = 0 s) and to set the initial field values for particles (like velocity, orientation, acceleration and etc).</li>
+<li><b>geometryPhasicFlow</b> converts user inputs for walls into a data structures that is used by PhasicFlow.</li>
+</ul>
+<h1>Models and features for simulations</h1>
+<h2>General representation of walls</h2>
+<p>Walls can be defined in three ways in PhasicFlow:</p><ul>
+<li><b>Builtin walls</b> in PhasicFlow that include plane wall, cylinder/cone wall, cuboid, circle.</li>
+<li><b>stl wall</b> that reads the data of the wall from an ASCII stl file.</li>
+<li><b>foamPatch wall</b> that reads the OpenFOAM mesh and converts the boundary patches into PhasicFlow walls (this feature is only available when performing CFD-DEM simulation using OpenFOAM).</li>
+</ul>
+<p>Walls can be fixed or in motion during simulations. Various motion models are implemented to cover most of the wall motions in phasicFlow (<a href="./../../../src/MotionModel/">see the source code</a>):</p><ul>
+<li><b>fixedWall</b> model, in which all walls are fixed. This model is mostly useful for granular flow under gravity or gas-solid flows (CFD-DEM).</li>
+<li><b>rotatingAxisMotion</b> model, in which walls are rotating around an axis of rotation with specified rotation speed. This model covers a wide range of granular flows in which the whole or a part of geometry is rotating, like mixers.</li>
+<li><b>multiRotatingAxisMotion</b> model, in which a combination of rotations can be specified. One axis of rotation can itself have another axis of rotation, and so on. This creates the possibility of defining very complex motion pattern for walls, like what we see in Nauta blenders.</li>
+<li><b>vibratingMotion</b> model, in which walls vibrates based on a sinusoidal model with specified frequency and amplitude. In addition to these models, the user can add other motion models to the code based on their need.</li>
+</ul>
+<h2>High precision integeration methods</h2>
+<p>The precision of integration in a DEM simulation is very important. Since sudden changes in the interaction forces occur during simulations (when objects contact or when they rebound). High precision integration methods makes it possible to accurately track position and velocity of objects (specially when they are in contact). When using these methods, it is possible to choose larger time steps for integration without loosing accuracy and causing instability in the simulation. Although a high-precision integration requires more computations, but the benefits of choosing larger time steps in simulation can totally compensate it. Various integration methods are implemented in PhasicFlow:</p>
+<table class="markdownTable">
+<tr class="markdownTableHead">
+<th class="markdownTableHeadLeft">Integration Method </th><th class="markdownTableHeadCenter">Order </th><th class="markdownTableHeadCenter">Type  </th></tr>
+<tr class="markdownTableRowOdd">
+<td class="markdownTableBodyLeft">AdamsBashforth2 </td><td class="markdownTableBodyCenter">2 </td><td class="markdownTableBodyCenter">one-step  </td></tr>
+<tr class="markdownTableRowEven">
+<td class="markdownTableBodyLeft">AdamsBashforth3 </td><td class="markdownTableBodyCenter">3 </td><td class="markdownTableBodyCenter">one-step  </td></tr>
+<tr class="markdownTableRowOdd">
+<td class="markdownTableBodyLeft">AdamsBashforth4 </td><td class="markdownTableBodyCenter">4 </td><td class="markdownTableBodyCenter">one-step  </td></tr>
+<tr class="markdownTableRowEven">
+<td class="markdownTableBodyLeft">AdamsBashforth5 </td><td class="markdownTableBodyCenter">5 </td><td class="markdownTableBodyCenter">one-step  </td></tr>
+<tr class="markdownTableRowOdd">
+<td class="markdownTableBodyLeft">AdamsMoulton3 </td><td class="markdownTableBodyCenter">3 </td><td class="markdownTableBodyCenter">predictor-corrector  </td></tr>
+<tr class="markdownTableRowEven">
+<td class="markdownTableBodyLeft">AdamsMoulton4 </td><td class="markdownTableBodyCenter">4 </td><td class="markdownTableBodyCenter">predictor-corrector  </td></tr>
+<tr class="markdownTableRowOdd">
+<td class="markdownTableBodyLeft">AdamsMoulton5 </td><td class="markdownTableBodyCenter">5 </td><td class="markdownTableBodyCenter">predictor-corrector  </td></tr>
+</table>
+<h2>Contact force models</h2>
+<p>Linear and non-linear visco-elastic contact force models are considered in the simulation. In addition to these, limited and non-limited Coulomb's friction model can be used to account for the friction between objects. For spherical objects, rolling friction can also be specified between bodies in contact.</p>
+<h2>Particle insertion</h2>
+<p>Particles can be inserted during simulation from specified region at specified rate and time interval. Any number of insertion regions can be defined in a simulation. Various region types are considered here: box, cylinder and sphere. Particles are inserted into the simulation through the specified region.</p>
+<h2>restarting/resuming a simulation</h2>
+<h1>Postprocessing tools</h1>
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 <table class="directory">
-<tr id="row_0_" class="even"><td class="entry"><span style="width:16px;display:inline-block;">&#160;</span><a class="el" href="md_doc_mdDocs_phasicFlowFeatures.html" target="_self">PhasicFlow Features</a></td><td class="desc"></td></tr>
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+   <div id="projectname"><a href="https://cemf.ir">PhasicFlow</a>
+   &#160;<span id="projectnumber"><a href="https://cemf.ir">v0.1</a></span>
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+  <div class="headertitle">
+<div class="title">PhasicFlow Features </div>  </div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><h1>Building options</h1>
+<p>You can build PhasicFlow to be executed on multi-core CPUs or GPUs. It is also possible to select the type of floating point variables in PhasicFlow: double or float. float type requires less memory and mostly consumes less time of a processor to complete a mathematical operation. So, there is a benefit for using floats in DEM simulation specially when GPU is targeted for computations. Build options for PhasicFlow:</p><ul>
+<li><b>serial (double or sinlge type)</b>: execution on one cpu core</li>
+<li><b>OpenMp (double or single type)</b>: execution on multiple cores of a CPU</li>
+<li><b>cuda (double or sngle type)</b>: execution on cuda-enabled GPUs</li>
+</ul>
+<h1>Preprocessing tools</h1>
+<p>Preprocessing tools are used to facilitate the process of case setup. They include tools for defining initial state of particles and geometry conversion.</p><ul>
+<li><b>particlesPhasicFlow</b> tool can be used to define the initial position of particles (for example at t = 0 s) and to set the initial field values for particles (like velocity, orientation, acceleration and etc).</li>
+<li><b>geometryPhasicFlow</b> converts user inputs for walls into a data structures that is used by PhasicFlow.</li>
+</ul>
+<h1>Models and features for simulations</h1>
+<h2>General representation of walls</h2>
+<p>Walls can be defined in three ways in PhasicFlow:</p><ul>
+<li><b>Builtin walls</b> in PhasicFlow that include plane wall, cylinder/cone wall, cuboid, circle.</li>
+<li><b>stl wall</b> that reads the data of the wall from an ASCII stl file.</li>
+<li><b>foamPatch wall</b> that reads the OpenFOAM mesh and converts the boundary patches into PhasicFlow walls (this feature is only available when performing CFD-DEM simulation using OpenFOAM).</li>
+</ul>
+<p>Walls can be fixed or in motion during simulations. Various motion models are implemented to cover most of the wall motions in phasicFlow (<a href="./../../../src/MotionModel/">see the source code</a>):</p><ul>
+<li><b>fixedWall</b> model, in which all walls are fixed. This model is mostly useful for granular flow under gravity or gas-solid flows (CFD-DEM).</li>
+<li><b>rotatingAxisMotion</b> model, in which walls are rotating around an axis of rotation with specified rotation speed. This model covers a wide range of granular flows in which the whole or a part of geometry is rotating, like mixers.</li>
+<li><b>multiRotatingAxisMotion</b> model, in which a combination of rotations can be specified. One axis of rotation can itself have another axis of rotation, and so on. This creates the possibility of defining very complex motion pattern for walls, like what we see in Nauta blenders.</li>
+<li><b>vibratingMotion</b> model, in which walls vibrates based on a sinusoidal model with specified frequency and amplitude. In addition to these models, the user can add other motion models to the code based on their need.</li>
+</ul>
+<h2>High precision integeration methods</h2>
+<p>The precision of integration in a DEM simulation is very important. Since sudden changes in the interaction forces occur during simulations (when objects contact or when they rebound). High precision integration methods makes it possible to accurately track position and velocity of objects (specially when they are in contact). When using these methods, it is possible to choose larger time steps for integration without loosing accuracy and causing instability in the simulation. Although a high-precision integration requires more computations, but the benefits of choosing larger time steps in simulation can totally compensate it. Various integration methods are implemented in PhasicFlow:</p>
+<table class="markdownTable">
+<tr class="markdownTableHead">
+<th class="markdownTableHeadLeft">Integration Method </th><th class="markdownTableHeadCenter">Order </th><th class="markdownTableHeadCenter">Type  </th></tr>
+<tr class="markdownTableRowOdd">
+<td class="markdownTableBodyLeft">AdamsBashforth2 </td><td class="markdownTableBodyCenter">2 </td><td class="markdownTableBodyCenter">one-step  </td></tr>
+<tr class="markdownTableRowEven">
+<td class="markdownTableBodyLeft">AdamsBashforth3 </td><td class="markdownTableBodyCenter">3 </td><td class="markdownTableBodyCenter">one-step  </td></tr>
+<tr class="markdownTableRowOdd">
+<td class="markdownTableBodyLeft">AdamsBashforth4 </td><td class="markdownTableBodyCenter">4 </td><td class="markdownTableBodyCenter">one-step  </td></tr>
+<tr class="markdownTableRowEven">
+<td class="markdownTableBodyLeft">AdamsBashforth5 </td><td class="markdownTableBodyCenter">5 </td><td class="markdownTableBodyCenter">one-step  </td></tr>
+<tr class="markdownTableRowOdd">
+<td class="markdownTableBodyLeft">AdamsMoulton3 </td><td class="markdownTableBodyCenter">3 </td><td class="markdownTableBodyCenter">predictor-corrector  </td></tr>
+<tr class="markdownTableRowEven">
+<td class="markdownTableBodyLeft">AdamsMoulton4 </td><td class="markdownTableBodyCenter">4 </td><td class="markdownTableBodyCenter">predictor-corrector  </td></tr>
+<tr class="markdownTableRowOdd">
+<td class="markdownTableBodyLeft">AdamsMoulton5 </td><td class="markdownTableBodyCenter">5 </td><td class="markdownTableBodyCenter">predictor-corrector  </td></tr>
+</table>
+<h2>Contact force models</h2>
+<p>Linear and non-linear visco-elastic contact force models are considered in the simulation. In addition to these, limited and non-limited Coulomb's friction model can be used to account for the friction between objects. For spherical objects, rolling friction can also be specified between bodies in contact.</p>
+<h2>Particle insertion</h2>
+<p>Particles can be inserted during simulation from specified region at specified rate and time interval. Any number of insertion regions can be defined in a simulation. Various region types are considered here: box, cylinder and sphere. Particles are inserted into the simulation through the specified region.</p>
+<h2>restarting/resuming a simulation</h2>
+<p>It is possible to resume a simulation fron any time-folder that is avaiable in the simulation case setup directory. PhasicFlow restart the simulation from that time folder.</p>
+<h1>Postprocessing tools</h1>
+<ul>
+<li><b>pFlowToVTK</b> is used to convert simulation results into vtk file format. vtk file format can be read by Paraview for visualizing the results.</li>
+<li><b>postprocessPhasicFlow</b> is a tool for performing various cell-based averaging on the fields. </li>
+</ul>
+</div></div><!-- contents -->
+</div><!-- PageDoc -->
+</div><!-- doc-content -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.17 </li>
+  </ul>
+</div>
+</body>
+</html>
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diff --git a/doc/code-documentation/html/search/pages_0.js b/doc/code-documentation/html/search/pages_0.js
index 4d25f335..af9ee1bc 100644
--- a/doc/code-documentation/html/search/pages_0.js
+++ b/doc/code-documentation/html/search/pages_0.js
@@ -1,4 +1,4 @@
 var searchData=
 [
-  ['phasicflow_20features_5402',['PhasicFlow Features',['../md_doc_mdDocs_phasicFlowFeatures.html',1,'']]]
+  ['phasicflow_20features_5402',['PhasicFlow Features',['../phasicFlowFeatures.html',1,'']]]
 ];
diff --git a/doc/mdDocs/mainpage.md b/doc/mdDocs/mainpage.md
index 0ce41bf1..0fdf50f9 100644
--- a/doc/mdDocs/mainpage.md
+++ b/doc/mdDocs/mainpage.md
@@ -2,7 +2,7 @@ PhasicFlow is an open-source, parallel, multi-artitecture code for discrete elem
 It solves the Newton's second law of motion and Euler's second law of motion for the translational and rotational motion of spherical particles. The code is not restricted to a specifict geometry or wall motion. It is designed in a way that additional features can be added to the code very easily.
 
 ## Explore more
-* [Features of PhasicFlow](https://github.com/PhasicFlow/phasicFlow/wiki/Features-of-PhasicFlow)
+* [Features of PhasicFlow](@ref phasicFlowFeatures)
 * [How to build PhasicFlow](https://github.com/PhasicFlow/phasicFlow/wiki/How-to-Build-PhasicFlow)
 * How to setup and run granular flow simulations
 * [Benchmarks and performance tests](https://github.com/PhasicFlow/phasicFlow/wiki/Performance-of-phasicFlow)
diff --git a/doc/mdDocs/phasicFlowFeatures.md b/doc/mdDocs/phasicFlowFeatures.md
index 9597b641..8d6a9815 100644
--- a/doc/mdDocs/phasicFlowFeatures.md
+++ b/doc/mdDocs/phasicFlowFeatures.md
@@ -1,4 +1,64 @@
-# PhasicFlow Features
-## General representation of walls
-## Various contact force models
-## High precision integeration methods
+# PhasicFlow Features {#phasicFlowFeatures}
+
+## Building options
+You can build PhasicFlow to be executed on multi-core CPUs or GPUs. It is also possible to select the type of floating point variables in PhasicFlow: double or float. float type requires less memory and mostly consumes less time of a processor to complete a mathematical operation. So, there is a benefit for using floats in DEM simulation specially when GPU is targeted for computations. 
+Build options for PhasicFlow:
+* **serial (double or sinlge type)**: execution on one cpu core
+* **OpenMp (double or single type)**: execution on multiple cores of a CPU
+* **cuda (double or sngle type)**: execution on cuda-enabled GPUs
+
+
+
+## Preprocessing tools
+Preprocessing tools are used to facilitate the process of case setup. They include tools for defining initial state of particles and geometry conversion. 
+* **particlesPhasicFlow** tool can be used to define the initial position of particles (for example at t = 0 s) and to set the initial field values for particles (like velocity, orientation, acceleration and etc).
+* **geometryPhasicFlow** converts user inputs for walls into a data structures that is used by PhasicFlow.
+
+
+
+## Models and features for simulations
+
+
+### General representation of walls
+
+Walls can be defined in three ways in PhasicFlow:
+* **Builtin walls** in PhasicFlow that include plane wall, cylinder/cone wall, cuboid, circle.
+* **stl wall**  that reads the data of the wall from an ASCII stl file.
+* **foamPatch wall** that reads the OpenFOAM mesh and converts the boundary patches into PhasicFlow walls (this feature is only available when performing CFD-DEM simulation using OpenFOAM).
+
+Walls can be fixed or in motion during simulations. Various motion models are implemented to cover most of the wall motions in phasicFlow ([see the source code] (./../../../src/MotionModel/)):
+* **fixedWall**  model, in which all walls are fixed. This model is mostly useful for granular flow under gravity or gas-solid flows (CFD-DEM). 
+* **rotatingAxisMotion**  model, in which walls are rotating around an axis of rotation with specified rotation speed. This model covers a wide range of granular flows in which the whole or a part of geometry is rotating, like mixers. 
+* **multiRotatingAxisMotion** model, in which a combination of rotations can be specified. One axis of rotation can itself have another axis of rotation, and so on. This creates the possibility of defining very complex motion pattern for walls, like what we see in Nauta blenders.
+* **vibratingMotion** model, in which walls vibrates based on a sinusoidal model with specified frequency and amplitude.
+In addition to these models, the user can add other motion models to the code based on their need. 
+
+
+### High precision integeration methods
+The precision of integration in a DEM simulation is very important. Since sudden changes in the interaction forces occur during simulations (when objects contact or when they rebound). High precision integration methods makes it possible to accurately track position and velocity of objects (specially when they are in contact). When using these methods, it is possible to choose larger time steps for integration without loosing accuracy and causing instability in the simulation. Although  a high-precision integration requires more computations, but the benefits of choosing larger time steps in simulation can totally compensate it. 
+Various integration methods are implemented in PhasicFlow:
+
+| Integration Method | Order | Type|
+| :--- | :---: | :---: |
+| AdamsBashforth2 | 2 | one-step |
+| AdamsBashforth3 | 3 | one-step |
+| AdamsBashforth4 | 4 | one-step |
+| AdamsBashforth5 | 5 | one-step |
+| AdamsMoulton3 | 3 | predictor-corrector |
+| AdamsMoulton4 | 4 | predictor-corrector |
+| AdamsMoulton5 | 5 | predictor-corrector |
+
+
+### Contact force models
+Linear and non-linear visco-elastic contact force models are considered in the simulation. In addition to these, limited and non-limited Coulomb's friction model can be used to account for the friction between objects. For spherical objects, rolling friction can also be specified between bodies in contact. 
+
+### Particle insertion
+Particles can be inserted during simulation from specified region at specified rate and time interval. Any number of insertion regions can be defined in a simulation. Various region types are considered here: box, cylinder and sphere. Particles are inserted into the simulation through the specified region.
+
+### restarting/resuming a simulation
+It is possible to resume a simulation fron any time-folder that is avaiable in the simulation case setup directory. PhasicFlow restart the simulation from that time folder.
+
+## Postprocessing tools
+
+* **pFlowToVTK** is used to convert simulation results into vtk file format. vtk file format can be read by Paraview for visualizing the results.
+* **postprocessPhasicFlow** is a tool for performing various cell-based averaging on the fields.