From 569646c6acf41457147e2fdbc22a383dcab47c5e Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 12:03:10 +0430 Subject: [PATCH 01/11] Tutorials are updated --- .../caseSetup/interaction | 32 +++++++++---------- 1 file changed, 16 insertions(+), 16 deletions(-) mode change 100644 => 100755 tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction old mode 100644 new mode 100755 index 9e154f4c..6593ff8b --- a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction @@ -6,47 +6,47 @@ objectName interaction; objectType dicrionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -materials (prop1); // properties of material +materials (prop1); // properties of material -densities (1000.0); // density of materials [kg/m3] +densities (1000.0); // density of materials [kg/m3] -contactListType sortedContactList; +contactListType sortedContactList; contactSearch { - method NBS; // method for broad search + method NBS; // method for broad search - updateInterval 10; + updateInterval 10; - sizeRatio 1.1; + sizeRatio 1.1; cellExtent 0.55; - adjustableBox Yes; + adjustableBox Yes; } model { - contactForceModel nonLinearNonLimited; + contactForceModel nonLinearNonLimited; - rollingFrictionModel normal; + rollingFrictionModel normal; // Property (solid-solid Properties) - Yeff (1.0e6); // Young modulus [Pa] + Yeff (1.0e6); // Young modulus [Pa] - Geff (0.8e6); // Shear modulus [Pa] + Geff (0.8e6); // Shear modulus [Pa] - nu (0.25); // Poisson's ratio [-] + nu (0.25); // Poisson's ratio [-] - en (0.7); // coefficient of normal restitution + en (0.7); // coefficient of normal restitution - et (1.0); // coefficient of tangential restitution + et (1.0); // coefficient of tangential restitution - mu (0.3); // dynamic friction + mu (0.3); // dynamic friction - mur (0.1); // rolling friction + mur (0.1); // rolling friction } From 180bc29df41a6ce08ed641889ee788c037b196a6 Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 12:08:25 +0430 Subject: [PATCH 02/11] Tutorials are updated. --- .../binarySystemOfParticles/caseSetup/particleInsertion | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) mode change 100644 => 100755 tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion old mode 100644 new mode 100755 index 3629d63f..25c1d909 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion @@ -6,9 +6,8 @@ objectName particleInsertion; objectType dicrionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -active No; // is insertion active -> yes or no - -collisionCheck No; // is checked -> yes or no +collisionCheck No; // is checked -> yes or no +active No; // is insertion active -> yes or no From 526059707b1fd2c1d0b57e0c504ab0807b566b41 Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 12:09:52 +0430 Subject: [PATCH 03/11] Tutorials are updated. --- .../sphereGranFlow/binarySystemOfParticles/caseSetup/shapes | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) mode change 100644 => 100755 tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes old mode 100644 new mode 100755 index 625afe3a..bc016686 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes @@ -6,9 +6,9 @@ objectName sphereDict; objectType sphereShape; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -names (smallSphere largeSphere); // names of shapes +names (smallSphere largeSphere); // names of shapes -diameters (0.003 0.005); // diameter of shapes +diameters (0.003 0.005); // diameter of shapes -materials (prop1 prop1); // material names for shapes +materials (prop1 prop1); // material names for shapes \ No newline at end of file From 7b6271a16553c12f70793f2b89ff39a64543cbff Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 12:15:45 +0430 Subject: [PATCH 04/11] Tutorial is updated for version 1.x. --- .../settings/domainDict | 24 +++++++++---------- 1 file changed, 12 insertions(+), 12 deletions(-) mode change 100644 => 100755 tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict old mode 100644 new mode 100755 index f4679bbb..a94bdb3c --- a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict @@ -6,11 +6,11 @@ objectName domainDict; objectType dictionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -globalBox // Simulation domain: every particles that goes outside this domain will be deleted +globalBox // Simulation domain: every particles that goes outside this domain will be deleted { - min (-0.12 -0.12 0); + min (-0.12 -0.12 0); - max (0.12 0.12 0.1); + max (0.12 0.12 0.1); } decomposition @@ -23,41 +23,41 @@ boundaries // Determines how often (how many iterations) do you want to // rebuild the list of particles in the neighbor list // of all boundaries in the simulation domain - neighborListUpdateInterval 50; + neighborListUpdateInterval 50; // Determines how often do you want to update the new changes in the boundary - updateInterval 10; + updateInterval 10; // The distance from the boundary plane within which particles are marked to be in the boundary list - neighborLength 0.004; + neighborLength 0.004; left { - type exit; // other options: periodict, reflective + type exit; // other options: periodict, reflective } right { - type exit; // other options: periodict, reflective + type exit; // other options: periodict, reflective } bottom { - type exit; // other options: periodict, reflective + type exit; // other options: periodict, reflective } top { - type exit; // other options: periodict, reflective + type exit; // other options: periodict, reflective } rear { - type exit; // other options: periodict, reflective + type exit; // other options: periodict, reflective } front { - type exit; // other options: periodict, reflective + type exit; // other options: periodict, reflective } } \ No newline at end of file From 7b2c7c6199ebc547f008ac267bc693917eca84f5 Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 12:19:37 +0430 Subject: [PATCH 05/11] Tutorial is updated for 1.x. --- .../settings/geometryDict | 50 +++++++++---------- 1 file changed, 25 insertions(+), 25 deletions(-) mode change 100644 => 100755 tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict old mode 100644 new mode 100755 index 6dfadd8b..db1c16ea --- a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict @@ -6,17 +6,17 @@ objectName geometryDict; objectType dictionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -motionModel rotatingAxis; // motion model can be rotatingAxis or stationary or vibrating +motionModel rotatingAxis; // motion model can be rotatingAxis or stationary or vibrating -rotatingAxisInfo // information for rotatingAxis motion model +rotatingAxisInfo // information for rotatingAxis motion model { rotAxis { - p1 (0.0 0.0 0.0); // first point for the axis of rotation + p1 (0.0 0.0 0.0); // first point for the axis of rotation - p2 (0.0 0.0 1.0); // second point for the axis of rotation + p2 (0.0 0.0 1.0); // second point for the axis of rotation - omega 1.214; // rotation speed (rad/s) + omega 1.214; // rotation speed (rad/s) } } @@ -24,21 +24,21 @@ surfaces { cylinder { - type cylinderWall; // type of the wall + type cylinderWall; // other options: cuboidWall and planeWall - p1 (0.0 0.0 0.0); // begin point of cylinder axis + p1 (0.0 0.0 0.0); // begin point of cylinder axis - p2 (0.0 0.0 0.1); // end point of cylinder axis + p2 (0.0 0.0 0.1); // end point of cylinder axis - radius1 0.12; // radius at p1 + radius1 0.12; // radius at p1 - radius2 0.12; // radius at p2 + radius2 0.12; // radius at p2 - resolution 24; // number of divisions + resolution 24; // number of divisions - material prop1; // material name of this wall + material prop1; // material name of this wall - motion rotAxis; // motion component name + motion rotAxis; // motion component name } /* @@ -47,19 +47,19 @@ surfaces wall1 { - type planeWall; // type of the wall + type planeWall; // other options: cuboidWall and cylinderWall p1 (-0.12 -0.12 0.0); // first point of the wall - p2 ( 0.12 -0.12 0.0); // second point of the wall + p2 (0.12 -0.12 0.0); // second point of the wall - p3 ( 0.12 0.12 0.0); // third point of the wall + p3 (0.12 0.12 0.0); // third point of the wall - p4 (-0.12 0.12 0.0); // fourth point of the wall + p4 (-0.12 0.12 0.0); // fourth point of the wall - material prop1; // material name of the wall + material prop1; // material name of the wall - motion rotAxis; // motion component name + motion rotAxis; // motion component name } /* @@ -68,19 +68,19 @@ surfaces wall2 { - type planeWall; // type of the wall + type planeWall; // other options: cuboidWall and cylinderWall p1 (-0.12 -0.12 0.1); // first point of the wall - p2 ( 0.12 -0.12 0.1); // second point of the wall + p2 (0.12 -0.12 0.1); // second point of the wall - p3 ( 0.12 0.12 0.1); // third point of the wall + p3 (0.12 0.12 0.1); // third point of the wall - p4 (-0.12 0.12 0.1); // fourth point of the wall + p4 (-0.12 0.12 0.1); // fourth point of the wall - material prop1; // material name of the wall + material prop1; // material name of the wall - motion rotAxis; // motion component name + motion rotAxis; // motion component name } } From afa7d63c841ba6c3df9ccc98c5267146cdaedb79 Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 12:23:05 +0430 Subject: [PATCH 06/11] Tutorial is updated for version 1.x. --- .../binarySystemOfParticles/settings/particlesDict | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) mode change 100644 => 100755 tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict old mode 100644 new mode 100755 index 384c17c3..fb1c5e43 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict @@ -9,9 +9,8 @@ fileFormat ASCII; setFields { /* - Default value for fields defined for particles - These fields should always be defined for simulations with - spherical particles. + Default value for fields defined for particles: + These fields should always be defined for simulations with spherical particles */ defaultValue From 159ec5f1ff06752369ff2d8b08c9d753b62a8115 Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 12:25:10 +0430 Subject: [PATCH 07/11] Tutorial is updated for version 1.x. --- .../settings/settingsDict | 22 +++++++++---------- 1 file changed, 11 insertions(+), 11 deletions(-) mode change 100644 => 100755 tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict old mode 100644 new mode 100755 index 595daae5..cda6dfdf --- a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict @@ -6,29 +6,29 @@ objectName settingsDict; objectType dictionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -run binarySystemofParticles; +run binarySystemofParticles; -dt 0.00001; // time step for integration (s) +dt 0.00001; // time step for integration (seconds) -startTime 0; // start time for simulation +startTime 0.0; // start time for simulation -endTime 10; // end time for simulation +endTime 10.0; // end time for simulation -saveInterval 0.1; // time interval for saving the simulation +saveInterval 0.1; // time interval for saving the simulation -timePrecision 6; // maximum number of digits for time folder +timePrecision 6; // maximum number of digits for time folder -g (0 -9.8 0); // gravity vector (m/s2) +g (0 -9.8 0); // gravity vector (m/s2) // save necessary (i.e., required) data on disk includeObjects (diameter); // exclude unnecessary data from saving on disk excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); -integrationMethod AdamsBashforth2; // integration method +integrationMethod AdamsBashforth2; // integration method -writeFormat ascii; // data writting format (ascii or binary) +writeFormat ascii; // data writting format (ascii or binary) -timersReport Yes; // report timers +timersReport Yes; // report timers -timersReportInterval 0.01; // time interval for reporting timers +timersReportInterval 0.01; // time interval for reporting timers From 2f9db61983ab6a09b26ddf3461a5016de7adc2b8 Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 12:38:21 +0430 Subject: [PATCH 08/11] The Tutorial is updated for version 1.x. --- .../layeredSiloFilling/caseSetup/interaction | 21 +++++----- .../caseSetup/particleInsertion | 4 +- .../layeredSiloFilling/caseSetup/shapes | 6 +-- .../layeredSiloFilling/caseSetup/sphereShape | 12 ------ .../layeredSiloFilling/cleanThisCase | 0 .../layeredSiloFilling/runThisCase | 0 .../layeredSiloFilling/settings/domainDict | 4 +- .../layeredSiloFilling/settings/geometryDict | 42 +++++++++---------- .../layeredSiloFilling/settings/particlesDict | 18 ++++---- .../layeredSiloFilling/settings/settingsDict | 22 +++++----- 10 files changed, 58 insertions(+), 71 deletions(-) mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes delete mode 100755 tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/sphereShape mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/cleanThisCase mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/runThisCase mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict mode change 100644 => 100755 tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction old mode 100644 new mode 100755 index 2c2eac9e..107400c1 --- a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction +++ b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction @@ -6,9 +6,9 @@ objectName interaction; objectType dicrionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -materials (lightMat heavyMat wallMat); // a list of materials names +materials (lightMat heavyMat wallMat); // a list of materials names -densities (1000 1500.0 2500); // density of materials [kg/m3] +densities (1000 1500.0 2500); // density of materials [kg/m3] contactListType sortedContactList; @@ -37,33 +37,32 @@ model wallMat-wallMat ); */ - Yeff (1.0e6 1.0e6 1.0e6 // Young modulus [Pa] + Yeff (1.0e6 1.0e6 1.0e6 // Young modulus [Pa] 1.0e6 1.0e6 1.0e6); - Geff (0.8e6 0.8e6 0.8e6 // Shear modulus [Pa] + Geff (0.8e6 0.8e6 0.8e6 // Shear modulus [Pa] 0.8e6 0.8e6 0.8e6); - nu (0.25 0.25 0.25 // Poisson's ratio [-] + nu (0.25 0.25 0.25 // Poisson's ratio [-] 0.25 0.25 0.25); - en (0.97 0.97 0.85 // coefficient of normal restitution + en (0.97 0.97 0.85 // coefficient of normal restitution 0.97 0.85 1.00); - et (1.0 1.0 1.0 // coefficient of tangential restitution + et (1.0 1.0 1.0 // coefficient of tangential restitution 1.0 1.0 1.0); - mu (0.65 0.65 0.35 // dynamic friction + mu (0.65 0.65 0.35 // dynamic friction 0.65 0.35 0.35); - mur (0.1 0.1 0.1 // rolling friction + mur (0.1 0.1 0.1 // rolling friction 0.1 0.1 - 0.1); - + 0.1); } diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion old mode 100644 new mode 100755 index 860280e8..c6387c8e --- a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion +++ b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion @@ -6,9 +6,9 @@ objectName particleInsertion; objectType dicrionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -active yes; // is insertion active -> yes or no +active Yes; // is insertion active -> yes or no -checkForCollision No; // is checked -> yes or no +checkForCollision No; // is checked -> yes or no /* one layers of particles are packed diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes old mode 100644 new mode 100755 index 04cda25c..f35ae33c --- a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes +++ b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes @@ -6,8 +6,8 @@ objectName sphereDict; objectType sphereShape; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -names (lightSphere heavySphere); // names of shapes +names (lightSphere heavySphere); // names of shapes -diameters (0.007 0.007); // diameter of shapes +diameters (0.007 0.007); // diameter of shapes -materials (lightMat heavyMat); // material names for shapes +materials (lightMat heavyMat); // material names for shapes diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/sphereShape b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/sphereShape deleted file mode 100755 index 749d1f0c..00000000 --- a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/sphereShape +++ /dev/null @@ -1,12 +0,0 @@ -/* -------------------------------*- C++ -*--------------------------------- *\ -| phasicFlow File | -| copyright: www.cemf.ir | -\* ------------------------------------------------------------------------- */ -objectName sphereDict; -objectType sphereShape; -fileFormat ASCII; -/*---------------------------------------------------------------------------*/ - -names (lightSphere heavySphere); // names of shapes -diameters (0.007 0.007); // diameter of shapes -materials (lightMat heavyMat); // material names for shapes diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/cleanThisCase b/tutorials/sphereGranFlow/layeredSiloFilling/cleanThisCase old mode 100644 new mode 100755 diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/runThisCase b/tutorials/sphereGranFlow/layeredSiloFilling/runThisCase old mode 100644 new mode 100755 diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict b/tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict old mode 100644 new mode 100755 index 3ff734a8..1a8009f1 --- a/tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict +++ b/tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict @@ -21,10 +21,10 @@ boundaries neighborListUpdateInterval 30; // Determines how often do you want to update the new changes in the boundary - updateInterval 10; + updateInterval 10; // The distance from the boundary plane within which particles are marked to be in the boundary list - neighborLength 0.004; + neighborLength 0.004; left { diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict b/tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict old mode 100644 new mode 100755 index dcdd281e..3433f4f4 --- a/tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict +++ b/tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict @@ -6,7 +6,7 @@ objectName geometryDict; objectType dictionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -motionModel stationary; // motion model can be rotatingAxis or stationary or vibrating +motionModel stationary; // motion model can be rotatingAxis or stationary or vibrating stationaryInfo { @@ -17,36 +17,36 @@ surfaces { cylinderShell { - type cylinderWall; // type of the wall + type cylinderWall; // other options: cuboidWall and planeWall - p1 (0.0 0.0 0.0); // begin point of cylinder axis + p1 (0.0 0.0 0.0); // begin point of cylinder axis - p2 (0.0 0.0 0.4); // end point of cylinder axis + p2 (0.0 0.0 0.4); // end point of cylinder axis - radius1 0.1; // radius at p1 + radius1 0.1; // radius at p1 - radius2 0.1; // radius at p2 + radius2 0.1; // radius at p2 - resolution 36; // number of divisions + resolution 36; // number of divisions - material wallMat; // material name of this wall + material wallMat; // material name of this wall } coneShell { - type cylinderWall; // type of the wall + type cylinderWall; // other options: cuboidWall and planeWall - p1 (0.0 0.0 -0.1); // begin point of cylinder axis + p1 (0.0 0.0 -0.1); // begin point of cylinder axis - p2 (0.0 0.0 0.0); // end point of cylinder axis + p2 (0.0 0.0 0.0); // end point of cylinder axis - radius1 0.02; // radius at p1 + radius1 0.02; // radius at p1 - radius2 0.1; // radius at p2 + radius2 0.1; // radius at p2 - resolution 36; // number of divisions + resolution 36; // number of divisions - material wallMat; // material name of this wall + material wallMat; // material name of this wall } /* @@ -55,17 +55,17 @@ surfaces exitGate { - type planeWall; // type of the wall + type planeWall; // other options: cuboidWall and cylinderWall - p1 (-0.02 -0.02 -0.1); // first point of the wall + p1 (-0.02 -0.02 -0.1); // first point of the wall - p2 ( 0.02 -0.02 -0.1); // second point of the wall + p2 ( 0.02 -0.02 -0.1); // second point of the wall - p3 ( 0.02 0.02 -0.1); // third point of the wall + p3 ( 0.02 0.02 -0.1); // third point of the wall - p4 (-0.02 0.02 -0.1); // fourth point of the wall + p4 (-0.02 0.02 -0.1); // fourth point of the wall - material wallMat; // material name of the wall + material wallMat; // material name of the wall } } diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict b/tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict old mode 100644 new mode 100755 index ec788fbe..98cdc79e --- a/tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict +++ b/tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict @@ -16,13 +16,13 @@ setFields defaultValue { - velocity realx3 (0 0 0); // linear velocity (m/s) + velocity realx3 (0 0 0); // linear velocity (m/s) - acceleration realx3 (0 0 0); // linear acceleration (m/s2) + acceleration realx3 (0 0 0); // linear acceleration (m/s2) - rVelocity realx3 (0 0 0); // rotational velocity (rad/s) + rVelocity realx3 (0 0 0); // rotational velocity (rad/s) - shapeName word lightSphere; // name of the particle shape + shapeName word lightSphere; // name of the particle shape } selectors @@ -31,14 +31,14 @@ setFields positionParticles // positions particles { - method empty; // other options: ordered and random + method empty; // other options: ordered and random - regionType box; // other options: cylinder and sphere + regionType box; // other options: cylinder and sphere - boxInfo // box region for positioning particles + boxInfo // box region for positioning particles { - min (-0.08 -0.08 0.015); // lower corner point of the box + min (-0.08 -0.08 0.015); // lower corner point of the box - max ( 0.08 0.08 0.098); // upper corner point of the box + max ( 0.08 0.08 0.098); // upper corner point of the box } } diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict b/tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict old mode 100644 new mode 100755 index d1d09442..04b3b9b7 --- a/tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict +++ b/tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict @@ -6,29 +6,29 @@ objectName settingsDict; objectType dictionary; fileFormat ASCII; /*---------------------------------------------------------------------------*/ -run layerdSiloFilling; +run layerdSiloFilling; -dt 0.00001; // time step for integration (s) +dt 0.00001; // time step for integration (s) -startTime 0.0; // start time for simulation +startTime 0.0; // start time for simulation -endTime 5.0; // end time for simulation +endTime 5.0; // end time for simulation -saveInterval 0.05; // time interval for saving the simulation +saveInterval 0.05; // time interval for saving the simulation -timePrecision 6; // maximum number of digits for time folder +timePrecision 6; // maximum number of digits for time folder -g (0 0 -9.8); // gravity vector (m/s2) +g (0 0 -9.8); // gravity vector (m/s2) // save necessary (i.e., required) data on disk includeObjects (diameter); // exclude unnecessary data from saving on disk excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); -integrationMethod AdamsBashforth2; // integration method +integrationMethod AdamsBashforth2; // integration method -writeFormat ascii; // data writting format (ascii or binary) +writeFormat ascii; // data writting format (ascii or binary) -timersReport Yes; // report timers +timersReport Yes; // report timers -timersReportInterval 0.01; // time interval for reporting timers +timersReportInterval 0.01; // time interval for reporting timers From b591d8fda1a1bf0940ef71a8ae5dc9dbf17234e0 Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 13:10:19 +0430 Subject: [PATCH 09/11] binarySystemOfParticles updated --- .../binarySystemOfParticles/caseSetup/interaction | 1 - .../binarySystemOfParticles/caseSetup/particleInsertion | 2 -- .../sphereGranFlow/binarySystemOfParticles/caseSetup/shapes | 1 - .../sphereGranFlow/binarySystemOfParticles/settings/domainDict | 2 +- .../binarySystemOfParticles/settings/geometryDict | 2 -- .../binarySystemOfParticles/settings/particlesDict | 2 -- .../binarySystemOfParticles/settings/settingsDict | 1 + 7 files changed, 2 insertions(+), 9 deletions(-) diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction index 6593ff8b..3a7920f2 100755 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/interaction @@ -49,4 +49,3 @@ model mur (0.1); // rolling friction } - diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion index 25c1d909..47ba5063 100755 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/particleInsertion @@ -9,5 +9,3 @@ fileFormat ASCII; collisionCheck No; // is checked -> yes or no active No; // is insertion active -> yes or no - - diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes index bc016686..7c3fe1d3 100755 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/caseSetup/shapes @@ -11,4 +11,3 @@ names (smallSphere largeSphere); // names of shapes diameters (0.003 0.005); // diameter of shapes materials (prop1 prop1); // material names for shapes - \ No newline at end of file diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict index a94bdb3c..afda899f 100755 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/domainDict @@ -60,4 +60,4 @@ boundaries { type exit; // other options: periodict, reflective } -} \ No newline at end of file +} diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict index db1c16ea..baff5621 100755 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/geometryDict @@ -83,5 +83,3 @@ surfaces motion rotAxis; // motion component name } } - - diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict index fb1c5e43..1dcb3938 100755 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/particlesDict @@ -71,5 +71,3 @@ positionParticles // positions particles radius 0.117; // radius of cylinder } } - - diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict index cda6dfdf..b7aeb33b 100755 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/settings/settingsDict @@ -32,3 +32,4 @@ writeFormat ascii; // data writting format (ascii or binar timersReport Yes; // report timers timersReportInterval 0.01; // time interval for reporting timers + \ No newline at end of file From c8a28f82c9a25d23a97a44a633c6025173f057fc Mon Sep 17 00:00:00 2001 From: Ramin Khodabandeh Date: Tue, 28 May 2024 13:24:34 +0430 Subject: [PATCH 10/11] layeredSiloFilling updated --- .../sphereGranFlow/layeredSiloFilling/caseSetup/interaction | 2 ++ .../layeredSiloFilling/caseSetup/particleInsertion | 2 ++ .../sphereGranFlow/layeredSiloFilling/caseSetup/shapes | 2 ++ .../sphereGranFlow/layeredSiloFilling/settings/domainDict | 4 +++- .../sphereGranFlow/layeredSiloFilling/settings/geometryDict | 4 ++++ .../layeredSiloFilling/settings/particlesDict | 1 + .../sphereGranFlow/layeredSiloFilling/settings/settingsDict | 6 +++++- 7 files changed, 19 insertions(+), 2 deletions(-) diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction index 107400c1..d73e4195 100755 --- a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction +++ b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/interaction @@ -66,3 +66,5 @@ model 0.1); } + + diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion index c6387c8e..fd311c48 100755 --- a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion +++ b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/particleInsertion @@ -50,3 +50,5 @@ layer0 + + diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes index f35ae33c..603c28cb 100755 --- a/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes +++ b/tutorials/sphereGranFlow/layeredSiloFilling/caseSetup/shapes @@ -11,3 +11,5 @@ names (lightSphere heavySphere); // names of shapes diameters (0.007 0.007); // diameter of shapes materials (lightMat heavyMat); // material names for shapes + + diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict b/tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict index 1a8009f1..c9f52b8d 100755 --- a/tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict +++ b/tutorials/sphereGranFlow/layeredSiloFilling/settings/domainDict @@ -55,4 +55,6 @@ boundaries { type exit; // other options: periodict, reflective } -} \ No newline at end of file +} + + diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict b/tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict index 3433f4f4..fcab5c6d 100755 --- a/tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict +++ b/tutorials/sphereGranFlow/layeredSiloFilling/settings/geometryDict @@ -70,3 +70,7 @@ surfaces } + + + + diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict b/tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict index 98cdc79e..5145dddc 100755 --- a/tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict +++ b/tutorials/sphereGranFlow/layeredSiloFilling/settings/particlesDict @@ -42,3 +42,4 @@ positionParticles // positions particle max ( 0.08 0.08 0.098); // upper corner point of the box } } + diff --git a/tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict b/tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict index 04b3b9b7..44823844 100755 --- a/tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict +++ b/tutorials/sphereGranFlow/layeredSiloFilling/settings/settingsDict @@ -20,7 +20,8 @@ timePrecision 6; // maximum number of digits for time folder g (0 0 -9.8); // gravity vector (m/s2) -// save necessary (i.e., required) data on disk +// save data objects that are not automatically saved on disk. +// overrides the default behavior includeObjects (diameter); // exclude unnecessary data from saving on disk excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); @@ -32,3 +33,6 @@ writeFormat ascii; // data writting format (ascii or binar timersReport Yes; // report timers timersReportInterval 0.01; // time interval for reporting timers + + + From ca1bc218d2b84358ae542f57564996f969d340a1 Mon Sep 17 00:00:00 2001 From: ramin1728 <85011717+ramin1728@users.noreply.github.com> Date: Tue, 28 May 2024 13:26:34 +0330 Subject: [PATCH 11/11] Update README.md --- .../binarySystemOfParticles/README.md | 46 ++++++++++--------- 1 file changed, 24 insertions(+), 22 deletions(-) diff --git a/tutorials/sphereGranFlow/binarySystemOfParticles/README.md b/tutorials/sphereGranFlow/binarySystemOfParticles/README.md index b18c204c..299245d9 100644 --- a/tutorials/sphereGranFlow/binarySystemOfParticles/README.md +++ b/tutorials/sphereGranFlow/binarySystemOfParticles/README.md @@ -1,6 +1,6 @@ # Problem definition -A rotating drum with two particle sizes is randomly filled and let it rotate to see the segregation of particles. -The focus of this tutorial is to show how to use the pre-processing tool, `particlesPhasicFlow`, to create the initial mixture of small and large particles. + +A rotating drum is randomly filled with two particle sizes and rotated to observe particle segregation. The focus of this tutorial is to show how to use the preprocessing tool `particlesPhasicFlow` to create the initial mixture of small and large particles. **Note:** It is supposed that you have reviewed [simulating a rotating drum](https://github.com/PhasicFlow/phasicFlow/wiki/Simulating-a-rotating-drum) tutorial before starting this tutorial. @@ -14,11 +14,13 @@ a view of the rotating drum with small and large particles after 7 seconds of ro *** # Case setup -PhasicFlow simulation case setup is based on the text-based files that we provide in two folders located in the simulation case folder: `settings` and `caseSetup`. Here we will have a look at some important files and the rest can be found in the tutorial folder of this case setup. + +In the file `caseSetup/sphereShape` two particle types with the names `smallSphere` and `largeSphere` and the diameters 3 and 5 mm are defined. [Simulation case setup files can be found in tutorials/sphereGranFlow folder.](https://github.com/PhasicFlow/phasicFlow/tree/main/tutorials/sphereGranFlow/binarySystemOfParticles) ### Shape definition -In file `caseSetup/sphereShape`, two particle types with names `smallSphere` and `largeSphere` and diameters 3 and 5 mm are defined. + +In the file `caseSetup/sphereShape` two particle types with the names `smallSphere` and `largeSphere` and the diameters 3 and 5 mm are defined.
in caseSetup/sphereShape file @@ -31,7 +33,7 @@ materials (prop1 prop1); // material names for shapes ``` ### Positioning and initial mixture -In dictionary `positionParticles` located in file `settings/particlesDict`, 30000 particles are located in a cylindrical region. These particles are positioned in order along `z`, `x` and then `y` axis with 0.005 m distance between their centers. +In the dictionary `positionParticles` located in file `settings/particlesDict`, 30000 particles are located in a cylindrical region. These particles are positioned in order along `z`, `x` and then `y` axis with 0.005 m distance between their centers.
in settings/particlesDict file @@ -42,10 +44,16 @@ in settings/particlesDict file // positions particles positionParticles { - method positionOrdered; // ordered positioning + method ordered; // other options: random or empty - maxNumberOfParticles 30001; // maximum number of particles in the simulation - mortonSorting Yes; // perform initial sorting based on morton code? + orderedInfo + { + diameter 0.005; // minimum space between centers of particles + numPoints 30000; // number of particles in the simulation + axisOrder (z x y); // axis order for filling the space with particles + } + + regionType cylinder; // other options: box and sphere cylinder // cylinder region for positioning particles { @@ -53,17 +61,9 @@ positionParticles p2 (0.0 0.0 0.097); // end point of cylinder axis (m m m) radius 0.117; // radius of cylinder (m) } - - positionOrderedInfo - { - diameter 0.005; // minimum space between centers of particles - numPoints 30000; // number of particles in the simulation - axisOrder (z x y); // axis order for filling the space with particles - } } ``` - -In dictionary `setFields` located in file `settings/particlesDict`, you define the initial `velocity`, `acceleration`, `rotVelocity`, and `shapeName` fields for all 30000 particles in the simulation. In `selectors` dictionary, you can select subsets of particles and set the field value for these subsets. In `shapeAssigne` sub-dictionary, the `selectRange` selector is defined. It defines a range with `begin` (begin index), `end` (end index) and `stride` to select particles. And in `fieldValue` sub-dictionary, the fields values for selected particles are set (any number of field values can be set here). +In the `setFields` dictionary, located in the `settings/particlesDict` file, you define the initial `velocity`, `acceleration`, `rotVelocity` and `shapeName` fields for all 30000 particles in the simulation. In the `selectors' dictionary, you can select subsets of particles and set the field value for those subsets. The `selectRange` selector is defined in the `shapeAssigne` subdictionary. It defines a range with `begin`, `end` and `stride` to select particles. And in the `fieldValue` subdictionary the field values for selected particles are set (any number of field values can be set here). **Note:** Other selectors are: `selectBox` that selects particles inside a box and `randomSelect` that selects particles randomly from a given index range. @@ -77,7 +77,8 @@ setFields /* Default value for fields defined for particles These fields should always be defined for simulations with - spherical particles.*/ + spherical particles. +*/ defaultValue { @@ -91,8 +92,9 @@ setFields { shapeAssigne { - selector selectRange; // type of point selector - selectRangeInfo + selector stridedRange; // other options: box, cylinder, sphere, randomPoints + + stridedRangeInfo { begin 0; // begin index of points end 30000; // end index of points @@ -101,10 +103,10 @@ setFields fieldValue // fields that the selector is applied to { /* - sets shapeName of the selected points to largeSphere*/ + sets shapeName of the selected points to largeSphere + */ shapeName word largeSphere; } - } }