src folder

This commit is contained in:
hamidrezanorouzi
2022-09-05 01:56:29 +04:30
parent 9d177aba28
commit ac5c3f08af
97 changed files with 11707 additions and 13 deletions

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/*------------------------------- phasicFlow ---------------------------------
O C enter of
O O E ngineering and
O O M ultiscale modeling of
OOOOOOO F luid flow
------------------------------------------------------------------------------
Copyright (C): www.cemf.ir
email: hamid.r.norouzi AT gmail.com
------------------------------------------------------------------------------
Licence:
This file is part of phasicFlow code. It is a free software for simulating
granular and multiphase flows. You can redistribute it and/or modify it under
the terms of GNU General Public License v3 or any other later versions.
phasicFlow is distributed to help others in their research in the field of
granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the
implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-----------------------------------------------------------------------------*/
#include "sphereParticles.H"
#include "setFieldList.H"
#include "sphereParticlesKernels.H"
pFlow::uniquePtr<pFlow::List<pFlow::eventObserver*>>
pFlow::sphereParticles::getFieldObjectList()const
{
auto objListPtr = particles::getFieldObjectList();
objListPtr().push_back(
static_cast<eventObserver*>(&I_) );
return objListPtr;
}
bool pFlow::sphereParticles::diameterMassInertiaPropId
(
const word& shName,
real& diam,
real& mass,
real& I,
int8& propIdx
)
{
uint32 idx;
if( !shapes_.nameToIndex(shName, idx) )
{
printKeys(fatalErrorInFunction<<
" wrong shape name in the input: "<< shName<<endl<<
" available shape names are: ", shapes_.names())<<endl;
return false;
}
diam = shapes_.diameter(idx);
word materialName = shapes_.material(idx);
uint32 pIdx;
if( !property_.nameToIndex(materialName, pIdx) )
{
fatalErrorInFunction <<
" wrong material name "<< materialName <<" specified for shape "<< shName<<
" in the sphereShape dictionary.\n"<<
" available materials are "<< property_.materials()<<endl;
return false;
}
real rho = property_.density(pIdx);
mass = Pi/6.0*pow(diam,3.0)*rho;
I = 0.4 * mass * pow(diam/2.0,2.0);
propIdx= static_cast<int8>(pIdx);
return true;
}
bool pFlow::sphereParticles::initializeParticles()
{
int32IndexContainer indices(0, shapeName_.size());
return insertSphereParticles(shapeName_, indices);
}
bool pFlow::sphereParticles::beforeIteration()
{
particles::beforeIteration();
intPredictTimer_.start();
dynPointStruct_.predict(this->dt(), accelertion_);
rVelIntegration_().predict(this->dt(),rVelocity_, rAcceleration_);
intPredictTimer_.end();
return true;
}
bool pFlow::sphereParticles::iterate()
{
accelerationTimer_.start();
pFlow::sphereParticlesKernels::acceleration(
control().g(),
mass().deviceVectorAll(),
contactForce().deviceVectorAll(),
I().deviceVectorAll(),
contactTorque().deviceVectorAll(),
pStruct().activePointsMaskD(),
accelertion().deviceVectorAll(),
rAcceleration().deviceVectorAll()
);
accelerationTimer_.end();
intCorrectTimer_.start();
dynPointStruct_.correct(this->dt(), accelertion_);
rVelIntegration_().correct(this->dt(), rVelocity_, rAcceleration_);
intCorrectTimer_.end();
return true;
}
bool pFlow::sphereParticles::afterIteration()
{
return true;
}
bool pFlow::sphereParticles::insertSphereParticles(
const wordVector& names,
const int32IndexContainer& indices
)
{
if(names.size()!= indices.size())
{
fatalErrorInFunction <<
"sizes of names ("<<names.size()<<") and indices ("
<< indices.size()<<") do not match \n";
return false;
}
auto len = names.size();
realVector diamVec(len, RESERVE());
realVector massVec(len, RESERVE());
realVector IVec(len, RESERVE());
int8Vector pIdVec(len, RESERVE());
int32Vector IdVec(len, RESERVE());
real d, m, I;
int8 pId;
forAll(i, names )
{
if (diameterMassInertiaPropId(names[i], d, m, I, pId))
{
diamVec.push_back(d);
massVec.push_back(m);
IVec.push_back(I);
pIdVec.push_back(pId);
IdVec.push_back(idHandler_.getNextId());
}
else
{
fatalErrorInFunction<< "failed to calculate properties of shape " <<
names[i]<<endl;
return false;
}
}
if(!diameter_.insertSetElement(indices, diamVec))
{
fatalErrorInFunction<< " failed to insert diameters to the diameter field. \n";
return false;
}
if(!mass_.insertSetElement(indices, massVec))
{
fatalErrorInFunction<< " failed to insert mass to the mass field. \n";
return false;
}
if(!I_.insertSetElement(indices, IVec))
{
fatalErrorInFunction<< " failed to insert I to the I field. \n";
return false;
}
if(!propertyId_.insertSetElement(indices, pIdVec))
{
fatalErrorInFunction<< " failed to insert propertyId to the propertyId field. \n";
return false;
}
if(!id_.insertSetElement(indices, IdVec))
{
fatalErrorInFunction<< " failed to insert id to the id field. \n";
return false;
}
return true;
}
pFlow::sphereParticles::sphereParticles(
systemControl &control,
const property& prop
)
:
particles(
control,
control.settingsDict().getValOrSet(
"integrationMethod",
word("AdamsBashforth3")
)
),
property_(prop),
shapes_(
control.caseSetup().emplaceObjectOrGet<sphereShape>(
objectFile(
sphereShapeFile__,
"",
objectFile::READ_ALWAYS,
objectFile::WRITE_NEVER
)
)
),
I_(
this->time().emplaceObject<realPointField_D>(
objectFile(
"I",
"",
objectFile::READ_NEVER,
objectFile::WRITE_ALWAYS
),
pStruct(),
static_cast<real>(0.0000000001)
)
),
rVelocity_(
this->time().emplaceObject<realx3PointField_D>(
objectFile(
"rVelocity",
"",
objectFile::READ_IF_PRESENT,
objectFile::WRITE_ALWAYS
),
pStruct(),
zero3
)
),
rAcceleration_(
this->time().emplaceObject<realx3PointField_D>(
objectFile(
"rAcceleration",
"",
objectFile::READ_IF_PRESENT,
objectFile::WRITE_ALWAYS
),
pStruct(),
zero3
)
),
accelerationTimer_(
"Acceleration", &this->timers() ),
intPredictTimer_(
"Integration-predict", &this->timers() ),
intCorrectTimer_(
"Integration-correct", &this->timers() )
{
Report(1)<<"Creating integration method "<<greenText(this->integrationMethod())
<< " for rotational velocity."<<endReport;
rVelIntegration_ =
integration::create(
"rVelocity",
this->time().integration(),
this->pStruct(),
this->integrationMethod());
if( !rVelIntegration_ )
{
fatalErrorInFunction<<
" error in creating integration object for rVelocity. \n";
fatalExit;
}
if(!initializeParticles())
{
fatalExit;
}
}
bool pFlow::sphereParticles::insertParticles
(
const realx3Vector& position,
const wordVector& shapes,
const setFieldList& setField
)
{
if( position.size() != shapes.size() )
{
fatalErrorInFunction<<
" size of vectors position ("<<position.size()<<
") and shapes ("<<shapes.size()<<") are not the same. \n";
return false;
}
auto exclusionListAllPtr = getFieldObjectList();
auto newInsertedPtr = pStruct().insertPoints( position, exclusionListAllPtr());
if(!newInsertedPtr)
{
fatalErrorInFunction<<
" error in inserting points into pStruct. \n";
return false;
}
auto& newInserted = newInsertedPtr();
if(!shapeName_.insertSetElement(newInserted, shapes))
{
fatalErrorInFunction<<
" error in inserting shapes into sphereParticles system.\n";
return false;
}
if( !insertSphereParticles(shapes, newInserted) )
{
fatalErrorInFunction<<
"error in inserting shapes into the sphereParticles. \n";
return false;
}
for(auto sfEntry:setField)
{
if(!sfEntry.setPointFieldSelectedAll( time(), newInserted, false ))return false;
}
auto activeR = this->activeRange();
Report(1)<< "Active range is "<<yellowText("["<<activeR.first<<", "<<activeR.second<<")")<<
" and number of active points is "<< cyanText(this->numActive())<<
" and pointStructure capacity is "<<cyanText(this->capacity())<<endReport;
return true;
}

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/*------------------------------- phasicFlow ---------------------------------
O C enter of
O O E ngineering and
O O M ultiscale modeling of
OOOOOOO F luid flow
------------------------------------------------------------------------------
Copyright (C): www.cemf.ir
email: hamid.r.norouzi AT gmail.com
------------------------------------------------------------------------------
Licence:
This file is part of phasicFlow code. It is a free software for simulating
granular and multiphase flows. You can redistribute it and/or modify it under
the terms of GNU General Public License v3 or any other later versions.
phasicFlow is distributed to help others in their research in the field of
granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the
implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-----------------------------------------------------------------------------*/
/*!
@class pFlow::sphereParticles
@brief Class for managing spherical particles
This is a top-level class that contains the essential components for
defining spherical prticles in a DEM simulation.
*/
#ifndef __sphereParticles_H__
#define __sphereParticles_H__
#include "systemControl.H"
#include "particles.H"
#include "sphereShape.H"
#include "property.H"
#include "indexContainer.H"
namespace pFlow
{
class sphereParticles
:
public particles
{
protected:
/// reference to material properties
const property& property_;
/// reference to shapes
sphereShape& shapes_;
/// pointField of inertial of particles
realPointField_D& I_;
/// pointField of rotational Velocity of particles on device
realx3PointField_D& rVelocity_;
/// pointField of rotational acceleration of particles on device
realx3PointField_D& rAcceleration_;
/// rotational velocity integrator
uniquePtr<integration> rVelIntegration_ = nullptr;
/// timer for acceleration computations
Timer accelerationTimer_;
/// timer for integration computations (prediction step)
Timer intPredictTimer_;
/// timer for integration computations (correction step)
Timer intCorrectTimer_;
bool diameterMassInertiaPropId(const word& shName, real& diam, real& mass, real& I, int8& propIdx);
bool initializeParticles();
bool insertSphereParticles(const wordVector& names, const int32IndexContainer& indices);
virtual uniquePtr<List<eventObserver*>> getFieldObjectList()const override;
public:
/// construct from systemControl and property
sphereParticles(systemControl &control, const property& prop);
/// no copy constructor
sphereParticles(const sphereParticles&) = delete;
/// move constructor
sphereParticles(sphereParticles&&) = default;
/// no copy-assignement
sphereParticles& operator=(const sphereParticles&) = delete;
/// move-assignement
sphereParticles& operator=(sphereParticles&&) = default;
virtual ~sphereParticles()=default;
/**
* Insert new particles in position with specified shapes
*
* This function is involked by inserted object to insert new set of particles
* into the simulation.
* \param position position of new particles
* \param shape shape of new particles
* \param setField initial value of the selected fields for new particles
*/
bool insertParticles
(
const realx3Vector& position,
const wordVector& shapes,
const setFieldList& setField
) override ;
/// const reference to shapes object
const auto& shapes()const
{
return shapes_;
}
/// const reference to inertia pointField
const auto& I()const
{
return I_;
}
/// reference to inertia pointField
auto& I()
{
return I_;
}
const realx3Vector_D rVelocity()const
{
return rVelocity_;
}
const realVector_D& boundingSphere()const override
{
return this->diameter();
}
word shapeTypeName() const override
{
return "sphere";
}
void boundingSphereMinMax(
real& minDiam,
real& maxDiam )const override
{
shapes_.diameterMinMax(minDiam, maxDiam);
}
bool update(const eventMessage& msg) override
{
CONSUME_PARAM(msg);
return true;
}
realx3PointField_D& rAcceleration() override
{
return rAcceleration_;
}
const realx3PointField_D& rAcceleration() const override
{
return rAcceleration_;
}
/// before iteration step
bool beforeIteration() override;
/// iterate particles
bool iterate() override;
/// after iteration step
bool afterIteration() override;
}; //sphereParticles
} // pFlow
#endif //__sphereParticles_H__

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/*------------------------------- phasicFlow ---------------------------------
O C enter of
O O E ngineering and
O O M ultiscale modeling of
OOOOOOO F luid flow
------------------------------------------------------------------------------
Copyright (C): www.cemf.ir
email: hamid.r.norouzi AT gmail.com
------------------------------------------------------------------------------
Licence:
This file is part of phasicFlow code. It is a free software for simulating
granular and multiphase flows. You can redistribute it and/or modify it under
the terms of GNU General Public License v3 or any other later versions.
phasicFlow is distributed to help others in their research in the field of
granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the
implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-----------------------------------------------------------------------------*/
#ifndef __sphereParticlesKernels_H__
#define __sphereParticlesKernels_H__
namespace pFlow::sphereParticlesKernels
{
using rpAcceleration = Kokkos::RangePolicy<
DefaultExecutionSpace,
Kokkos::Schedule<Kokkos::Static>,
Kokkos::IndexType<int32>
>;
template<typename IncludeFunctionType>
void acceleration(
realx3 g,
deviceViewType1D<real> mass,
deviceViewType1D<realx3> force,
deviceViewType1D<real> I,
deviceViewType1D<realx3> torque,
IncludeFunctionType incld,
deviceViewType1D<realx3> lAcc,
deviceViewType1D<realx3> rAcc
)
{
auto activeRange = incld.activeRange();
if(incld.allActive())
{
Kokkos::parallel_for(
"pFlow::sphereParticlesKernels::acceleration",
rpAcceleration(activeRange.first, activeRange.second),
LAMBDA_HD(int32 i){
lAcc[i] = force[i]/mass[i] + g;
rAcc[i] = torque[i]/I[i];
});
}
else
{
Kokkos::parallel_for(
"pFlow::sphereParticlesKernels::acceleration",
rpAcceleration(activeRange.first, activeRange.second),
LAMBDA_HD(int32 i){
if(incld(i))
{
lAcc[i] = force[i]/mass[i] + g;
rAcc[i] = torque[i]/I[i];
}
});
}
Kokkos::fence();
}
}
#endif