doc/html updated for integration

This commit is contained in:
Hamidreza Norouzi
2023-04-23 12:52:57 -07:00
parent 01034d0a26
commit ce7070dc37
3087 changed files with 13986 additions and 12088 deletions

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@ -4,7 +4,7 @@
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta http-equiv="X-UA-Compatible" content="IE=9"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<meta name="description" content="PhasicFlow is an open-source parallel DEM package for simulating granular flow developed in C++ and can be exectued on both GPU (like cuda) and CPU.">
<meta name="description" content="PhasicFlow is an open-source parallel DEM (discrete element method) package for simulating granular flow. It is developed in C++ and can be exectued on both GPU (like CUDA) and CPU.">
<title>PhasicFlow: src/Integration/AdamsBashforth3/AdamsBashforth3.cpp Source File</title>
<link href="tabs.css" rel="stylesheet" type="text/css"/>
<script type="text/javascript" src="jquery.js"></script>
@ -138,123 +138,105 @@ $(document).ready(function(){initNavTree('AdamsBashforth3_8cpp_source.html','');
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<div class="line"><a name="l00033"></a><span class="lineno"> 33</span>&#160; <a class="code" href="classpFlow_1_1integration.html">integration</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>, owner, <a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>, method),</div>
<div class="line"><a name="l00034"></a><span class="lineno"> 34</span>&#160; <span class="comment">/*dy1_(</span></div>
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span>&#160;<span class="comment"> owner.emplaceObject&lt;realx3PointField_D&gt;(</span></div>
<div class="line"><a name="l00036"></a><span class="lineno"> 36</span>&#160;<span class="comment"> objectFile(</span></div>
<div class="line"><a name="l00037"></a><span class="lineno"> 37</span>&#160;<span class="comment"> groupNames(baseName,&quot;dy1&quot;),</span></div>
<div class="line"><a name="l00038"></a><span class="lineno"> 38</span>&#160;<span class="comment"> &quot;&quot;,</span></div>
<div class="line"><a name="l00039"></a><span class="lineno"> 39</span>&#160;<span class="comment"> objectFile::READ_IF_PRESENT,</span></div>
<div class="line"><a name="l00040"></a><span class="lineno"> 40</span>&#160;<span class="comment"> objectFile::WRITE_ALWAYS),</span></div>
<div class="line"><a name="l00041"></a><span class="lineno"> 41</span>&#160;<span class="comment"> pStruct,</span></div>
<div class="line"><a name="l00042"></a><span class="lineno"> 42</span>&#160;<span class="comment"> zero3)),</span></div>
<div class="line"><a name="l00043"></a><span class="lineno"> 43</span>&#160;<span class="comment"> dy2_(</span></div>
<div class="line"><a name="l00044"></a><span class="lineno"> 44</span>&#160;<span class="comment"> owner.emplaceObject&lt;realx3PointField_D&gt;(</span></div>
<div class="line"><a name="l00045"></a><span class="lineno"> 45</span>&#160;<span class="comment"> objectFile(</span></div>
<div class="line"><a name="l00046"></a><span class="lineno"> 46</span>&#160;<span class="comment"> groupNames(baseName,&quot;dy2&quot;),</span></div>
<div class="line"><a name="l00047"></a><span class="lineno"> 47</span>&#160;<span class="comment"> &quot;&quot;,</span></div>
<div class="line"><a name="l00048"></a><span class="lineno"> 48</span>&#160;<span class="comment"> objectFile::READ_IF_PRESENT,</span></div>
<div class="line"><a name="l00049"></a><span class="lineno"> 49</span>&#160;<span class="comment"> objectFile::WRITE_ALWAYS),</span></div>
<div class="line"><a name="l00050"></a><span class="lineno"> 50</span>&#160;<span class="comment"> pStruct,</span></div>
<div class="line"><a name="l00051"></a><span class="lineno"> 51</span>&#160;<span class="comment"> zero3))*/</span></div>
<div class="line"><a name="l00052"></a><span class="lineno"> 52</span>&#160; history_(</div>
<div class="line"><a name="l00053"></a><span class="lineno"> 53</span>&#160; owner.<a class="code" href="classpFlow_1_1repository.html#a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4">emplaceObject</a>&lt;<a class="code" href="classpFlow_1_1pointField.html">HistoryFieldType</a>&gt;(</div>
<div class="line"><a name="l00054"></a><span class="lineno"> 54</span>&#160; <a class="code" href="classpFlow_1_1objectFile.html">objectFile</a>(</div>
<div class="line"><a name="l00055"></a><span class="lineno"> 55</span>&#160; <a class="code" href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">groupNames</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>,<span class="stringliteral">&quot;AB3History&quot;</span>),</div>
<div class="line"><a name="l00056"></a><span class="lineno"> 56</span>&#160; <span class="stringliteral">&quot;&quot;</span>,</div>
<div class="line"><a name="l00057"></a><span class="lineno"> 57</span>&#160; objectFile::READ_IF_PRESENT,</div>
<div class="line"><a name="l00058"></a><span class="lineno"> 58</span>&#160; objectFile::WRITE_ALWAYS),</div>
<div class="line"><a name="l00059"></a><span class="lineno"> 59</span>&#160; <a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>,</div>
<div class="line"><a name="l00060"></a><span class="lineno"> 60</span>&#160; <a class="code" href="structpFlow_1_1AB3History.html">AB3History</a>({<a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>,<a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>})))</div>
<div class="line"><a name="l00061"></a><span class="lineno"> 61</span>&#160; </div>
<div class="line"><a name="l00062"></a><span class="lineno"> 62</span>&#160;{</div>
<div class="line"><a name="l00063"></a><span class="lineno"> 63</span>&#160; </div>
<div class="line"><a name="l00064"></a><span class="lineno"> 64</span>&#160;}</div>
<div class="line"><a name="l00065"></a><span class="lineno"> 65</span>&#160; </div>
<div class="line"><a name="l00066"></a><span class="lineno"> 66</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth3::predict</a></div>
<div class="line"><a name="l00067"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc"> 67</a></span>&#160;(</div>
<div class="line"><a name="l00068"></a><span class="lineno"> 68</span>&#160; <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt),</div>
<div class="line"><a name="l00069"></a><span class="lineno"> 69</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y),</div>
<div class="line"><a name="l00070"></a><span class="lineno"> 70</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)</div>
<div class="line"><a name="l00071"></a><span class="lineno"> 71</span>&#160;)</div>
<div class="line"><a name="l00072"></a><span class="lineno"> 72</span>&#160;{</div>
<div class="line"><a name="l00073"></a><span class="lineno"> 73</span>&#160; </div>
<div class="line"><a name="l00074"></a><span class="lineno"> 74</span>&#160; <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
<div class="line"><a name="l00075"></a><span class="lineno"> 75</span>&#160;}</div>
<div class="line"><a name="l00076"></a><span class="lineno"> 76</span>&#160; </div>
<div class="line"><a name="l00077"></a><span class="lineno"> 77</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div>
<div class="line"><a name="l00078"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb"> 78</a></span>&#160;(</div>
<div class="line"><a name="l00079"></a><span class="lineno"> 79</span>&#160; <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt,</div>
<div class="line"><a name="l00080"></a><span class="lineno"> 80</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y,</div>
<div class="line"><a name="l00081"></a><span class="lineno"> 81</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy</div>
<div class="line"><a name="l00082"></a><span class="lineno"> 82</span>&#160;)</div>
<div class="line"><a name="l00083"></a><span class="lineno"> 83</span>&#160;{</div>
<div class="line"><a name="l00084"></a><span class="lineno"> 84</span>&#160; </div>
<div class="line"><a name="l00085"></a><span class="lineno"> 85</span>&#160; <span class="keywordflow">if</span>(this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().allActive())</div>
<div class="line"><a name="l00086"></a><span class="lineno"> 86</span>&#160; {</div>
<div class="line"><a name="l00087"></a><span class="lineno"> 87</span>&#160; <span class="keywordflow">return</span> intAll(dt, y, dy, this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().activeRange());</div>
<div class="line"><a name="l00088"></a><span class="lineno"> 88</span>&#160; }</div>
<div class="line"><a name="l00089"></a><span class="lineno"> 89</span>&#160; <span class="keywordflow">else</span></div>
<div class="line"><a name="l00090"></a><span class="lineno"> 90</span>&#160; {</div>
<div class="line"><a name="l00091"></a><span class="lineno"> 91</span>&#160; <span class="keywordflow">return</span> intRange(dt, y, dy, this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().activePointsMaskD());</div>
<div class="line"><a name="l00092"></a><span class="lineno"> 92</span>&#160; }</div>
<div class="line"><a name="l00093"></a><span class="lineno"> 93</span>&#160; </div>
<div class="line"><a name="l00094"></a><span class="lineno"> 94</span>&#160; <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
<div class="line"><a name="l00095"></a><span class="lineno"> 95</span>&#160;}</div>
<div class="line"><a name="l00096"></a><span class="lineno"> 96</span>&#160; </div>
<div class="line"><a name="l00097"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d"> 97</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth3::setInitialVals</a>(</div>
<div class="line"><a name="l00098"></a><span class="lineno"> 98</span>&#160; <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
<div class="line"><a name="l00099"></a><span class="lineno"> 99</span>&#160; <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y)</div>
<div class="line"><a name="l00100"></a><span class="lineno"> 100</span>&#160;{</div>
<div class="line"><a name="l00101"></a><span class="lineno"> 101</span>&#160; <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
<div class="line"><a name="l00102"></a><span class="lineno"> 102</span>&#160;}</div>
<div class="line"><a name="l00103"></a><span class="lineno"> 103</span>&#160; </div>
<div class="line"><a name="l00104"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783"> 104</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth3::intAll</a>(</div>
<div class="line"><a name="l00105"></a><span class="lineno"> 105</span>&#160; <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
<div class="line"><a name="l00106"></a><span class="lineno"> 106</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
<div class="line"><a name="l00107"></a><span class="lineno"> 107</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
<div class="line"><a name="l00108"></a><span class="lineno"> 108</span>&#160; <a class="code" href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">range</a> activeRng)</div>
<div class="line"><a name="l00109"></a><span class="lineno"> 109</span>&#160;{</div>
<div class="line"><a name="l00110"></a><span class="lineno"> 110</span>&#160; <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
<div class="line"><a name="l00111"></a><span class="lineno"> 111</span>&#160; <span class="keyword">auto</span> d_y = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
<div class="line"><a name="l00112"></a><span class="lineno"> 112</span>&#160; <span class="keyword">auto</span> d_history = history_.deviceVectorAll();</div>
<div class="line"><a name="l00113"></a><span class="lineno"> 113</span>&#160; </div>
<div class="line"><a name="l00114"></a><span class="lineno"> 114</span>&#160; Kokkos::parallel_for(</div>
<div class="line"><a name="l00115"></a><span class="lineno"> 115</span>&#160; <span class="stringliteral">&quot;AdamsBashforth3::correct&quot;</span>,</div>
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<div class="line"><a name="l00117"></a><span class="lineno"> 117</span>&#160; <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">int32</a> i){</div>
<div class="line"><a name="l00118"></a><span class="lineno"> 118</span>&#160; <span class="keyword">auto</span> ldy = d_dy[i];</div>
<div class="line"><a name="l00119"></a><span class="lineno"> 119</span>&#160; d_y[i] += dt*( <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(23.0 / 12.0) * ldy </div>
<div class="line"><a name="l00120"></a><span class="lineno"> 120</span>&#160; - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(16.0 / 12.0) * d_history[i].dy1_ </div>
<div class="line"><a name="l00121"></a><span class="lineno"> 121</span>&#160; + <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(5.0 / 12.0) * d_history[i].dy2_);</div>
<div class="line"><a name="l00122"></a><span class="lineno"> 122</span>&#160; d_history[i] = {ldy ,d_history[i].dy1_};</div>
<div class="line"><a name="l00123"></a><span class="lineno"> 123</span>&#160; });</div>
<div class="line"><a name="l00124"></a><span class="lineno"> 124</span>&#160; Kokkos::fence();</div>
<div class="line"><a name="l00125"></a><span class="lineno"> 125</span>&#160; </div>
<div class="line"><a name="l00126"></a><span class="lineno"> 126</span>&#160; <span class="keywordflow">return</span> <span class="keyword">true</span>; </div>
<div class="line"><a name="l00127"></a><span class="lineno"> 127</span>&#160;}</div>
<div class="line"><a name="l00034"></a><span class="lineno"> 34</span>&#160; history_(</div>
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span>&#160; owner.<a class="code" href="classpFlow_1_1repository.html#a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4">emplaceObject</a>&lt;<a class="code" href="classpFlow_1_1pointField.html">pointField&lt;VectorSingle,AB3History&gt;</a>&gt;(</div>
<div class="line"><a name="l00036"></a><span class="lineno"> 36</span>&#160; <a class="code" href="classpFlow_1_1objectFile.html">objectFile</a>(</div>
<div class="line"><a name="l00037"></a><span class="lineno"> 37</span>&#160; <a class="code" href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">groupNames</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>,<span class="stringliteral">&quot;AB3History&quot;</span>),</div>
<div class="line"><a name="l00038"></a><span class="lineno"> 38</span>&#160; <span class="stringliteral">&quot;&quot;</span>,</div>
<div class="line"><a name="l00039"></a><span class="lineno"> 39</span>&#160; objectFile::READ_IF_PRESENT,</div>
<div class="line"><a name="l00040"></a><span class="lineno"> 40</span>&#160; objectFile::WRITE_ALWAYS),</div>
<div class="line"><a name="l00041"></a><span class="lineno"> 41</span>&#160; <a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>,</div>
<div class="line"><a name="l00042"></a><span class="lineno"> 42</span>&#160; <a class="code" href="structpFlow_1_1AB3History.html">AB3History</a>({<a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>,<a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>})))</div>
<div class="line"><a name="l00043"></a><span class="lineno"> 43</span>&#160; </div>
<div class="line"><a name="l00044"></a><span class="lineno"> 44</span>&#160;{</div>
<div class="line"><a name="l00045"></a><span class="lineno"> 45</span>&#160; </div>
<div class="line"><a name="l00046"></a><span class="lineno"> 46</span>&#160;}</div>
<div class="line"><a name="l00047"></a><span class="lineno"> 47</span>&#160; </div>
<div class="line"><a name="l00048"></a><span class="lineno"> 48</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth3::predict</a></div>
<div class="line"><a name="l00049"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc"> 49</a></span>&#160;(</div>
<div class="line"><a name="l00050"></a><span class="lineno"> 50</span>&#160; <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt),</div>
<div class="line"><a name="l00051"></a><span class="lineno"> 51</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y),</div>
<div class="line"><a name="l00052"></a><span class="lineno"> 52</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)</div>
<div class="line"><a name="l00053"></a><span class="lineno"> 53</span>&#160;)</div>
<div class="line"><a name="l00054"></a><span class="lineno"> 54</span>&#160;{</div>
<div class="line"><a name="l00055"></a><span class="lineno"> 55</span>&#160; </div>
<div class="line"><a name="l00056"></a><span class="lineno"> 56</span>&#160; <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
<div class="line"><a name="l00057"></a><span class="lineno"> 57</span>&#160;}</div>
<div class="line"><a name="l00058"></a><span class="lineno"> 58</span>&#160; </div>
<div class="line"><a name="l00059"></a><span class="lineno"> 59</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div>
<div class="line"><a name="l00060"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb"> 60</a></span>&#160;(</div>
<div class="line"><a name="l00061"></a><span class="lineno"> 61</span>&#160; <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt,</div>
<div class="line"><a name="l00062"></a><span class="lineno"> 62</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y,</div>
<div class="line"><a name="l00063"></a><span class="lineno"> 63</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy</div>
<div class="line"><a name="l00064"></a><span class="lineno"> 64</span>&#160;)</div>
<div class="line"><a name="l00065"></a><span class="lineno"> 65</span>&#160;{</div>
<div class="line"><a name="l00066"></a><span class="lineno"> 66</span>&#160; </div>
<div class="line"><a name="l00067"></a><span class="lineno"> 67</span>&#160; <span class="keywordflow">if</span>(this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().allActive())</div>
<div class="line"><a name="l00068"></a><span class="lineno"> 68</span>&#160; {</div>
<div class="line"><a name="l00069"></a><span class="lineno"> 69</span>&#160; <span class="keywordflow">return</span> intAll(dt, y, dy, this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().activeRange());</div>
<div class="line"><a name="l00070"></a><span class="lineno"> 70</span>&#160; }</div>
<div class="line"><a name="l00071"></a><span class="lineno"> 71</span>&#160; <span class="keywordflow">else</span></div>
<div class="line"><a name="l00072"></a><span class="lineno"> 72</span>&#160; {</div>
<div class="line"><a name="l00073"></a><span class="lineno"> 73</span>&#160; <span class="keywordflow">return</span> intRange(dt, y, dy, this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().activePointsMaskD());</div>
<div class="line"><a name="l00074"></a><span class="lineno"> 74</span>&#160; }</div>
<div class="line"><a name="l00075"></a><span class="lineno"> 75</span>&#160; </div>
<div class="line"><a name="l00076"></a><span class="lineno"> 76</span>&#160; <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
<div class="line"><a name="l00077"></a><span class="lineno"> 77</span>&#160;}</div>
<div class="line"><a name="l00078"></a><span class="lineno"> 78</span>&#160; </div>
<div class="line"><a name="l00079"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d"> 79</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth3::setInitialVals</a>(</div>
<div class="line"><a name="l00080"></a><span class="lineno"> 80</span>&#160; <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
<div class="line"><a name="l00081"></a><span class="lineno"> 81</span>&#160; <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y)</div>
<div class="line"><a name="l00082"></a><span class="lineno"> 82</span>&#160;{</div>
<div class="line"><a name="l00083"></a><span class="lineno"> 83</span>&#160; <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
<div class="line"><a name="l00084"></a><span class="lineno"> 84</span>&#160;}</div>
<div class="line"><a name="l00085"></a><span class="lineno"> 85</span>&#160; </div>
<div class="line"><a name="l00086"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783"> 86</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth3::intAll</a>(</div>
<div class="line"><a name="l00087"></a><span class="lineno"> 87</span>&#160; <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
<div class="line"><a name="l00088"></a><span class="lineno"> 88</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
<div class="line"><a name="l00089"></a><span class="lineno"> 89</span>&#160; <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
<div class="line"><a name="l00090"></a><span class="lineno"> 90</span>&#160; <a class="code" href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">range</a> activeRng)</div>
<div class="line"><a name="l00091"></a><span class="lineno"> 91</span>&#160;{</div>
<div class="line"><a name="l00092"></a><span class="lineno"> 92</span>&#160; <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
<div class="line"><a name="l00093"></a><span class="lineno"> 93</span>&#160; <span class="keyword">auto</span> d_y = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a18052bc1ad8ea07ea5b6205321cba10e">deviceVectorAll</a>();</div>
<div class="line"><a name="l00094"></a><span class="lineno"> 94</span>&#160; <span class="keyword">auto</span> d_history = history_.deviceVectorAll();</div>
<div class="line"><a name="l00095"></a><span class="lineno"> 95</span>&#160; </div>
<div class="line"><a name="l00096"></a><span class="lineno"> 96</span>&#160; Kokkos::parallel_for(</div>
<div class="line"><a name="l00097"></a><span class="lineno"> 97</span>&#160; <span class="stringliteral">&quot;AdamsBashforth3::correct&quot;</span>,</div>
<div class="line"><a name="l00098"></a><span class="lineno"> 98</span>&#160; <a class="code" href="classpFlow_1_1AdamsBashforth3.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> (activeRng.first, activeRng.second),</div>
<div class="line"><a name="l00099"></a><span class="lineno"> 99</span>&#160; <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">int32</a> i){</div>
<div class="line"><a name="l00100"></a><span class="lineno"> 100</span>&#160; <span class="keyword">auto</span> ldy = d_dy[i];</div>
<div class="line"><a name="l00101"></a><span class="lineno"> 101</span>&#160; d_y[i] += dt*( <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(23.0 / 12.0) * ldy </div>
<div class="line"><a name="l00102"></a><span class="lineno"> 102</span>&#160; - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(16.0 / 12.0) * d_history[i].dy1_ </div>
<div class="line"><a name="l00103"></a><span class="lineno"> 103</span>&#160; + <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(5.0 / 12.0) * d_history[i].dy2_);</div>
<div class="line"><a name="l00104"></a><span class="lineno"> 104</span>&#160; d_history[i] = {ldy ,d_history[i].dy1_};</div>
<div class="line"><a name="l00105"></a><span class="lineno"> 105</span>&#160; });</div>
<div class="line"><a name="l00106"></a><span class="lineno"> 106</span>&#160; Kokkos::fence();</div>
<div class="line"><a name="l00107"></a><span class="lineno"> 107</span>&#160; </div>
<div class="line"><a name="l00108"></a><span class="lineno"> 108</span>&#160; <span class="keywordflow">return</span> <span class="keyword">true</span>; </div>
<div class="line"><a name="l00109"></a><span class="lineno"> 109</span>&#160;}</div>
</div><!-- fragment --></div><!-- contents -->
</div><!-- doc-content -->
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth3::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00097">AdamsBashforth3.cpp:97</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsBashforth3::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00087">AdamsBashforth3.hpp:87</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth3::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00079">AdamsBashforth3.cpp:79</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsBashforth3::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00087">AdamsBashforth3.hpp:87</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00046">builtinTypes.hpp:46</a></div></div>
<div class="ttc" id="astructpFlow_1_1AB3History_html"><div class="ttname"><a href="structpFlow_1_1AB3History.html">pFlow::AB3History</a></div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00031">AdamsBashforth3.hpp:31</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a304d8581876270871949bf5d4755036a"><div class="ttname"><a href="namespacepFlow.html#a304d8581876270871949bf5d4755036a">pFlow::range</a></div><div class="ttdeci">kRange&lt; int &gt; range</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00059">KokkosTypes.hpp:59</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_afb1938bc6cfc199cbd70f224040d4afc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth3::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3Vector_D &amp;UNUSED(y), realx3Vector_D &amp;UNUSED(dy)) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00067">AdamsBashforth3.cpp:67</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_afb1938bc6cfc199cbd70f224040d4afc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth3::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3Vector_D &amp;UNUSED(y), realx3Vector_D &amp;UNUSED(dy)) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00049">AdamsBashforth3.cpp:49</a></div></div>
<div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00035">integration.hpp:35</a></div></div>
<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00049">integration.hpp:49</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00063">builtinTypes.hpp:63</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00097">types.hpp:97</a></div></div>
<div class="ttc" id="aclasspFlow_1_1repository_html_a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4"><div class="ttname"><a href="classpFlow_1_1repository.html#a5bbe8f5fd6ec57500bcbc3e5cd5c9cf4">pFlow::repository::emplaceObject</a></div><div class="ttdeci">T &amp; emplaceObject(const objectFile &amp;objf, Args &amp;&amp;... args)</div><div class="ttdef"><b>Definition:</b> <a href="repositoryTemplates_8cpp_source.html#l00038">repositoryTemplates.cpp:38</a></div></div>
<div class="ttc" id="aAdamsBashforth3_8hpp_html"><div class="ttname"><a href="AdamsBashforth3_8hpp.html">AdamsBashforth3.hpp</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00078">AdamsBashforth3.cpp:78</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a1f266356c0127865641500aea4aca002"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a1f266356c0127865641500aea4aca002">pFlow::AdamsBashforth3::AdamsBashforth3</a></div><div class="ttdeci">AdamsBashforth3(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00026">AdamsBashforth3.cpp:26</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdoc">Correction/main integration step.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00060">AdamsBashforth3.cpp:60</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a1f266356c0127865641500aea4aca002"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a1f266356c0127865641500aea4aca002">pFlow::AdamsBashforth3::AdamsBashforth3</a></div><div class="ttdeci">AdamsBashforth3(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00026">AdamsBashforth3.cpp:26</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00156">bTypesFunctions.cpp:156</a></div></div>
<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00035">pointField.hpp:35</a></div></div>
<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00044">pointStructure.hpp:44</a></div></div>
<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00053">builtinTypes.hpp:53</a></div></div>
<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00047">VectorSingle.hpp:47</a></div></div>
<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00033">objectFile.hpp:33</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth3::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00104">AdamsBashforth3.cpp:104</a></div></div>
<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth3::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00086">AdamsBashforth3.cpp:86</a></div></div>
<div class="ttc" id="asetPointStructure_8hpp_html_a385e32971df44b131e4498181a949a91"><div class="ttname"><a href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a></div><div class="ttdeci">auto &amp; pStruct</div><div class="ttdef"><b>Definition:</b> <a href="setPointStructure_8hpp_source.html#l00024">setPointStructure.hpp:24</a></div></div>
<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00054">pFlowMacros.hpp:54</a></div></div>
<div class="ttc" id="anamespacepFlow_html_a12b4d93aa9730629403d73e84386bff5"><div class="ttname"><a href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">pFlow::groupNames</a></div><div class="ttdeci">word groupNames(const word &amp;bw, const word &amp;tw, char sep='.')</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00151">bTypesFunctions.cpp:151</a></div></div>