documentation for v1.0

.gitignore

@@ -44,7 +44,6 @@ bin/**
 lib/**
 test*/**
 **/**notnow
-doc/code-documentation/
 doc/DTAGS
 # all possible time folders
 **/[0-9]

CMakeLists.txt

@@ -3,17 +3,30 @@ cmake_minimum_required(VERSION 3.16 FATAL_ERROR)
 # set the project name and version
 project(phasicFlow VERSION 1.0 )
 
-set(CMAKE_CXX_STANDARD 20 CACHE STRING "" FORCE)
+set(CMAKE_CXX_STANDARD 17 CACHE STRING "" FORCE)
 set(CMAKE_CXX_STANDARD_REQUIRED True)
 set(CMAKE_INSTALL_PREFIX ${phasicFlow_SOURCE_DIR} CACHE PATH "Install path of phasicFlow" FORCE)
-set(CMAKE_BUILD_TYPE Release CACHE STRING "build type")
+set(CMAKE_BUILD_TYPE Debug CACHE STRING "build type" FORCE)
 set(BUILD_SHARED_LIBS ON CACHE BOOL "Build using shared libraries" FORCE)
 mark_as_advanced(FORCE var BUILD_SHARED_LIBS)
 
-message(STATUS "Install prefix is:" ${CMAKE_INSTALL_PREFIX})
+message(STATUS ${CMAKE_INSTALL_PREFIX})
 
 include(cmake/globals.cmake)
 
+#Kokkos directory to be included 
+set(Kokkos_Source_DIR)
+
+if(DEFINED ENV{Kokkos_DIR})
+   set(Kokkos_Source_DIR $ENV{Kokkos_DIR})
+else()
+  set(Kokkos_Source_DIR $ENV{HOME}/Kokkos/kokkos)
+endif()
+message(STATUS "Kokkos source directory is ${Kokkos_Source_DIR}")
+add_subdirectory(${Kokkos_Source_DIR} ./kokkos)
+Kokkos_cmake_settings()
+
+
 option(pFlow_STD_Parallel_Alg "Use TTB std parallel algorithms" ON)
 option(pFlow_Build_Serial "Build phasicFlow and backends for serial execution" OFF)
 option(pFlow_Build_OpenMP "Build phasicFlow and backends for OpenMP execution" OFF)
@@ -21,8 +34,6 @@ option(pFlow_Build_Cuda   "Build phasicFlow and backends for Cuda execution" OFF
 option(pFlow_Build_Double "Build phasicFlow with double precision floating-oint variables" ON)
 option(pFlow_Build_MPI    "Build for MPI parallelization. This will enable multi-gpu run, CPU run on clusters (distributed memory machine). Use this combination Cuda+MPI, OpenMP + MPI or Serial+MPI " OFF)
 
-#for installing the required packages
-include(cmake/preReq.cmake)
 
 if(pFlow_Build_Serial)
 	set(Kokkos_ENABLE_SERIAL ON CACHE BOOL "Serial execution" FORCE) 
@@ -35,8 +46,7 @@ elseif(pFlow_Build_OpenMP )
 	set(Kokkos_ENABLE_OPENMP ON CACHE BOOL "OpenMP execution" FORCE)
 	set(Kokkos_ENABLE_CUDA OFF CACHE BOOL "Cuda execution" FORCE)
 	set(Kokkos_ENABLE_CUDA_LAMBDA OFF CACHE BOOL "Cuda execution" FORCE)
-	set(Kokkos_DEFAULT_HOST_PARALLEL_EXECUTION_SPACE Serial CACHE STRING "" FORCE)
+	set(Kokkos_DEFAULT_HOST_PARALLEL_EXECUTION_SPACE SERIAL CACHE STRING "" FORCE)
-	set(Kokkos_DEFAULT_DEVICE_PARALLEL_EXECUTION_SPACE OpenMP CACHE STRING "" FORCE)
 	set(Kokkos_ENABLE_CUDA_CONSTEXPR OFF CACHE BOOL "Enable constexpr on cuda code" FORCE)
 elseif(pFlow_Build_Cuda)
 	set(Kokkos_ENABLE_SERIAL ON CACHE BOOL "Serial execution" FORCE) 
@@ -55,7 +65,6 @@ include(cmake/makeExecutableGlobals.cmake)
 
 configure_file(phasicFlowConfig.H.in phasicFlowConfig.H)
 set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
-
 #add a global include directory 
 include_directories(src/setHelpers src/demComponent "${PROJECT_BINARY_DIR}")
 

DEMSystems/grainDEMSystem/grainDEMSystem.cpp

@@ -78,14 +78,9 @@ pFlow::grainDEMSystem::grainDEMSystem(
 	REPORT(0)<< "\nCreating surface geometry for grainDEMSystem . . . "<<END_REPORT;
 	geometry_ = geometry::create(Control(), Property());
 
-	REPORT(0)<<"Reading shape dictionary ..."<<END_REPORT;
-	grains_ = makeUnique<grainShape>(
-		pFlow::shapeFile__,
-		&Control().caseSetup(),
-		Property() );	
 
 	REPORT(0)<<"\nReading grain particles . . ."<<END_REPORT;
-	particles_ = makeUnique<grainFluidParticles>(Control(), grains_());
+	particles_ = makeUnique<grainFluidParticles>(Control(), Property());
 
 
 	insertion_ = makeUnique<grainInsertion>( 

DEMSystems/grainDEMSystem/grainDEMSystem.hpp

@@ -46,8 +46,6 @@ protected:
 
 	uniquePtr<geometry> 			geometry_ = nullptr;
 
-	uniquePtr<grainShape> 			grains_   = nullptr;
-
 	uniquePtr<grainFluidParticles>  particles_ = nullptr;
 
 	uniquePtr<grainInsertion> 		insertion_ = nullptr;

DEMSystems/grainDEMSystem/grainFluidParticles.cpp

@@ -35,8 +35,8 @@ void pFlow::grainFluidParticles::checkHostMemory()
 
 pFlow::grainFluidParticles::grainFluidParticles(
     systemControl &control,
-    const grainShape& grains)
+    const property &prop)
-    : grainParticles(control, grains),
+    : grainParticles(control, prop),
       fluidForce_(
           objectFile(
               "fluidForce",
@@ -67,7 +67,7 @@ bool pFlow::grainFluidParticles::beforeIteration()
 
 bool pFlow::grainFluidParticles::iterate() 
 {
-	const auto ti = this->TimeInfo();
+
 	accelerationTimer().start();
 		pFlow::grainFluidParticlesKernels::acceleration(
 			control().g(),
@@ -78,16 +78,16 @@ bool pFlow::grainFluidParticles::iterate()
 			contactTorque().deviceViewAll(),
 			fluidTorque_.deviceViewAll(),
 			pStruct().activePointsMaskDevice(),
-			acceleration().deviceViewAll(),
+			accelertion().deviceViewAll(),
 			rAcceleration().deviceViewAll()
 			);
 	accelerationTimer().end();
 	
 	intCorrectTimer().start();
 	
-		dynPointStruct().correct(ti.dt());
+		dynPointStruct().correct(this->dt(), accelertion());
 	
-		rVelIntegration().correct(ti.dt(), rVelocity(), rAcceleration());
+		rVelIntegration().correct(this->dt(), rVelocity(), rAcceleration());
 	
 	intCorrectTimer().end();
 	

DEMSystems/grainDEMSystem/grainFluidParticles.hpp

@@ -59,7 +59,7 @@ protected:
 public:
 
 	/// construct from systemControl and property 
-	grainFluidParticles(systemControl &control, const grainShape& grains);
+	grainFluidParticles(systemControl &control, const property& prop);
 
 	~grainFluidParticles() override = default;
 	

DEMSystems/sphereDEMSystem/sphereDEMSystem.cpp

@@ -75,18 +75,12 @@ pFlow::sphereDEMSystem::sphereDEMSystem(
 		propertyFile__,
     	Control().caseSetup().path());
 
-
 	REPORT(0)<< "\nCreating surface geometry for sphereDEMSystem . . . "<<END_REPORT;
 	geometry_ = geometry::create(Control(), Property());
 
-	REPORT(0)<<"Reading shapes dictionary..."<<END_REPORT;
-	spheres_ = makeUnique<sphereShape>(
-		pFlow::shapeFile__, 
-		&Control().caseSetup(), 
-		Property());
 
 	REPORT(0)<<"\nReading sphere particles . . ."<<END_REPORT;
-	particles_ = makeUnique<sphereFluidParticles>(Control(), spheres_());
+	particles_ = makeUnique<sphereFluidParticles>(Control(), Property());
 
 
 	insertion_ = makeUnique<sphereInsertion>( 

DEMSystems/sphereDEMSystem/sphereDEMSystem.hpp

@@ -46,8 +46,6 @@ protected:
 
 	uniquePtr<geometry> 			geometry_ = nullptr;
 
-	uniquePtr<sphereShape> 			spheres_  = nullptr;
-
 	uniquePtr<sphereFluidParticles> particles_ = nullptr;
 
 	uniquePtr<sphereInsertion> 		insertion_ = nullptr;

DEMSystems/sphereDEMSystem/sphereFluidParticles.cpp

@@ -32,8 +32,8 @@ void pFlow::sphereFluidParticles::checkHostMemory()
 
 pFlow::sphereFluidParticles::sphereFluidParticles(
     systemControl &control,
-    const sphereShape& shpShape)
+    const property &prop)
-    : sphereParticles(control, shpShape),
+    : sphereParticles(control, prop),
       fluidForce_(
           objectFile(
               "fluidForce",
@@ -65,7 +65,7 @@ bool pFlow::sphereFluidParticles::beforeIteration()
 
 bool pFlow::sphereFluidParticles::iterate() 
 {
-	const auto ti = this->TimeInfo();
+
 	accelerationTimer().start();
 		pFlow::sphereFluidParticlesKernels::acceleration(
 			control().g(),
@@ -76,16 +76,16 @@ bool pFlow::sphereFluidParticles::iterate()
 			contactTorque().deviceViewAll(),
 			fluidTorque_.deviceViewAll(),
 			pStruct().activePointsMaskDevice(),
-			acceleration().deviceViewAll(),
+			accelertion().deviceViewAll(),
 			rAcceleration().deviceViewAll()
 			);
 	accelerationTimer().end();
 	
 	intCorrectTimer().start();
 	
-		dynPointStruct().correct(ti.dt());
+		dynPointStruct().correct(this->dt(), accelertion());
 	
-		rVelIntegration().correct(ti.dt(), rVelocity(), rAcceleration());
+		rVelIntegration().correct(this->dt(), rVelocity(), rAcceleration());
 	
 	intCorrectTimer().end();
 	

DEMSystems/sphereDEMSystem/sphereFluidParticles.hpp

@@ -66,7 +66,7 @@ protected:
 public:
 
 	/// construct from systemControl and property 
-	sphereFluidParticles(systemControl &control, const sphereShape& shpShape);
+	sphereFluidParticles(systemControl &control, const property& prop);
 	
 	/// before iteration step 
 	bool beforeIteration() override;

README.md

@@ -1,76 +1,48 @@
-<div align="center">
+<div align ="center">
-  <img src="doc/phasicFlow_logo_github.png" style="width: 400px;" alt="PhasicFlow Logo">
+<img src="doc/phasicFlow_logo_github.png" style="width: 400px;">
 </div>
 
-## **PhasicFlow: High-Performance Discrete Element Method Simulations**
 
-PhasicFlow is a robust, open-source C++ framework designed for the efficient simulation of granular materials using the Discrete Element Method (DEM). Leveraging parallel computing paradigms, PhasicFlow is capable of executing simulations on shared-memory multi-core architectures, including CPUs and NVIDIA GPUs (CUDA-enabled). The core parallelization strategy focuses on loop-level parallelism, enabling significant performance gains on modern hardware. Users can seamlessly transition between serial execution on standard PCs, parallel execution on multi-core CPUs (OpenMP), and accelerated simulations on GPUs. Currently, PhasicFlow supports simulations involving up to 80 million particles on a single desktop workstation. Detailed performance benchmarks are available on the [PhasicFlow Wiki](https://github.com/PhasicFlow/phasicFlow/wiki/Performance-of-phasicFlow).
+**PhasicFlow** is a parallel C++ code for performing DEM simulations. It can run on shared-memory multi-core computational units such as multi-core CPUs or GPUs (for now it works on CUDA-enabled GPUs). The parallelization method mainly relies on loop-level parallelization on a shared-memory computational unit. You can build and run PhasicFlow in serial mode on regular PCs, in parallel mode for multi-core CPUs, or build it for a GPU device to off-load computations to a GPU. In its current statues you can simulate millions of particles (up to 80M particles tested) on a single desktop computer. You can see the [performance tests of PhasicFlow](https://github.com/PhasicFlow/phasicFlow/wiki/Performance-of-phasicFlow) in the wiki page.
 
-**Scalable Parallelism: MPI Integration**
+**MPI** parallelization with dynamic load balancing is under development. With this level of parallelization, PhasicFlow can leverage the computational power of **multi-gpu** workstations or clusters with distributed memory CPUs. 
+In summary PhasicFlow can have 6 execution modes:
+1. Serial on a single CPU core,
+2. Parallel on a multi-core computer/node (using OpenMP),
+3. Parallel on an nvidia-GPU (using Cuda),
+4. Parallel on distributed memory workstation (Using MPI)
+5. Parallel on distributed memory workstations with multi-core nodes (using MPI+OpenMP)
+6. Parallel on workstations with multiple GPUs (using MPI+Cuda).
+## How to build?
+You can build PhasicFlow for CPU and GPU executions. The latest release of PhasicFlow is v-0.1. [Here is a complete step-by-step procedure for building phasicFlow-v-0.1.](https://github.com/PhasicFlow/phasicFlow/wiki/How-to-Build-PhasicFlow).
 
-Ongoing development includes the integration of MPI-based parallelization with dynamic load balancing. This enhancement will extend PhasicFlow's capabilities to distributed memory environments, such as multi-GPU workstations and high-performance computing clusters. Upon completion, PhasicFlow will offer six distinct execution modes:
+## Online code documentation
+You can find a full documentation of the code, its features, and other related materials on [online documentation of the code](https://phasicflow.github.io/phasicFlow/)
 
-1.  **Serial Execution:** Single-core CPU.
+## How to use PhasicFlow?
-2.  **Shared-Memory Parallelism:** Multi-core CPU (OpenMP).
+You can navigate into [tutorials folder](./tutorials) in the phasicFlow folder to see some simulation case setups. If you need more detailed discription, visit our [wiki page tutorials](https://github.com/PhasicFlow/phasicFlow/wiki/Tutorials).  
-3.  **GPU Acceleration:** NVIDIA GPU (CUDA).
-4.  **Distributed-Memory Parallelism:** MPI.
-5.  **Hybrid Parallelism:** MPI + OpenMP.
-6.  **Multi-GPU Parallelism:** MPI + CUDA.
 
-## **Build and Installation**
+## [PhasicFlowPlus](https://github.com/PhasicFlow/PhasicFlowPlus)
+PhasicFlowPlus is and extension to PhasicFlow for simulating particle-fluid systems using resolved and unresolved CFD-DEM. [See the repository of this package.](https://github.com/PhasicFlow/PhasicFlowPlus)
 
-PhasicFlow can be compiled for both CPU and GPU execution.
 
-* **Current Development (v-1.0):** Comprehensive build instructions are available [here](https://github.com/PhasicFlow/phasicFlow/wiki/How-to-build-PhasicFlow%E2%80%90v%E2%80%901.0).
+## Supporting packages
-* **Latest Release (v-0.1):** Detailed build instructions are available [here](https://github.com/PhasicFlow/phasicFlow/wiki/How-to-Build-PhasicFlow).
+* [Kokkos](https://github.com/kokkos/kokkos) from National Technology & Engineering Solutions of Sandia, LLC (NTESS)
-
+* [CLI11 1.8](https://github.com/CLIUtils/CLI11) from University of Cincinnati.
-## **Comprehensive Documentation**
-
-In-depth documentation, including code structure, features, and usage guidelines, is accessible via the [online documentation portal](https://phasicflow.github.io/phasicFlow/).
-
-### **Tutorials and Examples**
-
-Practical examples and simulation setups are provided in the [tutorials directory](./tutorials). For detailed explanations and step-by-step guides, please refer to the [tutorial section on the PhasicFlow Wiki](https://github.com/PhasicFlow/phasicFlow/wiki/Tutorials).
-
-## Contributing to PhasicFlow
-We welcome contributions to PhasicFlow! Whether you're a developer or a new user, there are many ways to get involved. Here's how you can help:
-1. Bug Reports
-2. Suggestions for better user experience
-3. Feature request and algorithm improvements
-4. Tutorials, Simulation Case Setups and documentation
-5. Direct Code Contributions
-
-For more details on how you can contribute to PhasicFlow see [this page](https://github.com/PhasicFlow/phasicFlow/wiki/How-to-contribute-to-PhasicFlow). 
-
-## **PhasicFlowPlus: Coupled CFD-DEM Simulations**
-
-PhasicFlowPlus is an extension of PhasicFlow that facilitates the simulation of particle-fluid systems using resolved and unresolved CFD-DEM methods. The repository for PhasicFlowPlus can be found [here](https://github.com/PhasicFlow/PhasicFlowPlus).
-
-## How to cite PhasicFlow?
 
+## How to cite PhasicFlow
 If you are using PhasicFlow in your research or industrial work, cite the following [article](https://www.sciencedirect.com/science/article/pii/S0010465523001662):
-
 ```
-@article
+@article{NOROUZI2023108821,
-{
+title = {PhasicFlow: A parallel, multi-architecture open-source code for DEM simulations},
-  NOROUZI2023108821,
+journal = {Computer Physics Communications},
-  title = {PhasicFlow: A parallel, multi-architecture open-source code for DEM simulations},
+volume = {291},
-  journal = {Computer Physics Communications},
+pages = {108821},
-  volume = {291},
+year = {2023},
-  pages = {108821},
+issn = {0010-4655},
-  year = {2023},
+doi = {https://doi.org/10.1016/j.cpc.2023.108821},
-  issn = {0010-4655},
+url = {https://www.sciencedirect.com/science/article/pii/S0010465523001662},
-  doi = {https://doi.org/10.1016/j.cpc.2023.108821},
+author = {H.R. Norouzi},
-  url = {https://www.sciencedirect.com/science/article/pii/S0010465523001662},
+keywords = {Discrete element method, Parallel computing, CUDA, GPU, OpenMP, Granular flow}
-  author = {H.R. Norouzi},
-  keywords = {Discrete element method, Parallel computing, CUDA, GPU, OpenMP, Granular flow}
 }
 ```
-
-
-## **Dependencies**
-
-PhasicFlow relies on the following external libraries:
-
-* **Kokkos:** A community-led performance portability ecosystem within the Linux Foundation's High-Performance Software Foundation (HPSF). ([https://github.com/kokkos/kokkos](https://github.com/kokkos/kokkos))
-* **CLI11 1.8:** A command-line interface parser developed by the University of Cincinnati. ([https://github.com/CLIUtils/CLI11](https://github.com/CLIUtils/CLI11))

benchmarks/rotatingDrum/rotatingDrum_1mParticles/caseSetup/interaction

@@ -1,60 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     interaction;
-objectType     dictionary;
-fileFormat     ASCII;
-
-/*---------------------------------------------------------------------------*/
-
-materials   (glassMat wallMat); // a list of materials names
-
-densities   (2500.0 2500);      // density of materials [kg/m3]
-
-contactListType   sortedContactList;
-
-contactSearch
-{
-    method         NBS;
-
-    updateInterval   20;
-
-    sizeRatio       1.1;
-
-    cellExtent     0.55;
-
-    adjustableBox   Yes;
-}
-
-model
-{
-    contactForceModel    nonLinearLimited;
-
-    rollingFrictionModel normal;
-    
-    /*
-       Property (glassMat-glassMat      glassMat-wallMat
-                                        wallMat-wallMat);
-    */
-
-    Yeff (1.0e6  1.0e6  
-                 1.0e6);                                    // Young modulus [Pa]
-   
-    Geff (0.8e6  0.8e6  
-                 0.8e6);                                    // Shear modulus [Pa]
-
-    nu   (0.25   0.25  
-                 0.25);                                     // Poisson's ratio [-]
-
-    en   (0.97   0.85   
-                 1.00);                                     // coefficient of normal restitution
-
-    mu   (0.65   0.65   
-                 0.65);                                     // dynamic friction 
-
-    mur  (0.1    0.1    
-                 0.1);                                      // rolling friction 
-}
-

benchmarks/rotatingDrum/rotatingDrum_1mParticles/caseSetup/shapes

@@ -1,15 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     shapes;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-
-names          (glassBead);    // names of shapes 
-
-diameters      (0.004);        // diameter of shapes 
-
-materials      (glassMat);     // material names for shapes 

benchmarks/rotatingDrum/rotatingDrum_1mParticles/settings/domainDict

@@ -1,50 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName     domainDict;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-globalBox                                        // Simulation domain: every particles that goes outside this domain will be deleted
-{
-    min (-0.2 -0.2  0.0);
-    max ( 0.2  0.2  0.8);
-}
-
-boundaries
-{
-    neighborListUpdateInterval 200;
-    
-    updateInterval              20;
-    
-    left
-    {
-        type    exit;                            // other options: periodic, reflective 
-    }
-
-    right
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    bottom
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    top
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    rear
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    front
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_1mParticles/settings/geometryDict

@@ -1,86 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     geometryDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-motionModel rotatingAxis;         // motion model: rotating object around an axis
-
-rotatingAxisInfo                  // information for rotatingAxisMotion motion model 
-{
-    rotAxis 
-    {
-        p1    (0.0 0.0 0.0);      // first point for the axis of rotation    
-        
-        p2    (0.0 0.0 1.0);      // second point for the axis of rotation    
-        
-        omega 1.256;              // rotation speed (rad/s) => 12 rpm
-    }
-}
-
-surfaces
-{
-    cylinder
-    {
-        type        cylinderWall;          // type of the wall
-        
-        p1          (0.0 0.0 0.0);         // begin point of cylinder axis
-           
-        p2          (0.0 0.0 0.8);         // end point of cylinder axis
-        
-        radius1     0.2;                   // radius at p1
-        
-        radius2     0.2;                   // radius at p2
-        
-        resolution  24;                    // number of divisions
-        
-        material    wallMat;               // material name of this wall
-        
-        motion      rotAxis;               // motion component name 
-    }
-
-    /*
-        This is a plane wall at the rear end of cylinder
-    */
-    
-    wall1
-    {
-        type      planeWall;               // type of the wall  
-        
-        p1        (-0.2 -0.2 0.0);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.0);         // second point
-        
-        p3        ( 0.2  0.2 0.0);         // third point
-        
-        p4        (-0.2  0.2 0.0);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-
-    /*
-        This is a plane wall at the front end of cylinder
-    */
-    
-    wall2
-    {
-        type      planeWall;               // type of the wall
-        
-        p1        (-0.2 -0.2 0.8);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.8);         // second point
-        
-        p3        ( 0.2  0.2 0.8);         // third point
-        
-        p4        (-0.2  0.2 0.8);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_1mParticles/settings/particlesDict

@@ -1,47 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     particlesDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-setFields
-{
-    defaultValue 
-    {
-        velocity         realx3     (0 0 0);     // linear velocity (m/s)
-        acceleration     realx3     (0 0 0);     // linear acceleration (m/s2)
-        rotVelocity      realx3     (0 0 0);     // rotational velocity (rad/s)
-        shapeName        word       glassBead;   // name of the particle shape 
-    }
-
-    selectors
-    {}
-}
-
-positionParticles
-{
-    method ordered;
-
-    orderedInfo
-    {
-        diameter   0.004;           // minimum space between centers of particles
-        
-        numPoints  1000000;          // number of particles in the simulation 
-        
-        axisOrder  (z x y);         // axis order for filling the space with particles
-    }
-
-    regionType cylinder;            // other options: box and sphere    
-
-    cylinderInfo                    // cylinder for positioning particles 
-    {
-        p1     (0.0  0.0  0.01);    // lower corner point of the box 
-        
-        p2     (0.0  0.0  0.79);    // upper corner point of the box 
-        
-        radius 0.195;               // radius of cylinder 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_1mParticles/settings/settingsDict

@@ -1,34 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName    settingsDict;
-objectType    dictionary;
-fileFormat    ASCII;
-/*---------------------------------------------------------------------------*/
-run             rotatingDrum_1mParticles;
-
-dt              0.00001;      // time step for integration (s)
-
-startTime       0;            // start time for simulation 
-
-endTime         4;           // end time for simulation 
-
-saveInterval    0.2;          // time interval for saving the simulation
-
-timePrecision   5;            // maximum number of digits for time folder 
-
-g               (0 -9.8 0);   // gravity vector (m/s2) 
-
-includeObjects (diameter);                     // save necessary (i.e., required) data on disk
-
-// exclude unnecessary data from saving on disk
-excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); 
-
-integrationMethod         AdamsBashforth2;     // integration method 
-
-writeFormat               binary;              // data writting format (ascii or binary)
-
-timersReport              Yes;      
-
-timersReportInterval      0.01;    

benchmarks/rotatingDrum/rotatingDrum_250kParticles/caseSetup/interaction

@@ -1,60 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     interaction;
-objectType     dictionary;
-fileFormat     ASCII;
-
-/*---------------------------------------------------------------------------*/
-
-materials   (glassMat wallMat); // a list of materials names
-
-densities   (2500.0 2500);      // density of materials [kg/m3]
-
-contactListType   sortedContactList;
-
-contactSearch
-{
-    method         NBS;
-
-    updateInterval   20;
-
-    sizeRatio       1.1;
-
-    cellExtent     0.55;
-
-    adjustableBox   Yes;
-}
-
-model
-{
-    contactForceModel    nonLinearLimited;
-
-    rollingFrictionModel normal;
-    
-    /*
-       Property (glassMat-glassMat      glassMat-wallMat
-                                        wallMat-wallMat);
-    */
-
-    Yeff (1.0e6  1.0e6  
-                 1.0e6);                                    // Young modulus [Pa]
-   
-    Geff (0.8e6  0.8e6  
-                 0.8e6);                                    // Shear modulus [Pa]
-
-    nu   (0.25   0.25  
-                 0.25);                                     // Poisson's ratio [-]
-
-    en   (0.97   0.85   
-                 1.00);                                     // coefficient of normal restitution
-
-    mu   (0.65   0.65   
-                 0.65);                                     // dynamic friction 
-
-    mur  (0.1    0.1    
-                 0.1);                                      // rolling friction 
-}
-

benchmarks/rotatingDrum/rotatingDrum_250kParticles/caseSetup/shapes

@@ -1,15 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     shapes;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-
-names          (glassBead);    // names of shapes 
-
-diameters      (0.006);        // diameter of shapes 
-
-materials      (glassMat);     // material names for shapes 

benchmarks/rotatingDrum/rotatingDrum_250kParticles/settings/domainDict

@@ -1,50 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName     domainDict;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-globalBox                                        // Simulation domain: every particles that goes outside this domain will be deleted
-{
-    min (-0.2 -0.2  0.0);
-    max ( 0.2  0.2  0.8);
-}
-
-boundaries
-{
-    neighborListUpdateInterval 200;
-    
-    updateInterval              20;
-    
-    left
-    {
-        type    exit;                            // other options: periodic, reflective 
-    }
-
-    right
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    bottom
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    top
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    rear
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    front
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_250kParticles/settings/geometryDict

@@ -1,86 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     geometryDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-motionModel rotatingAxis;         // motion model: rotating object around an axis
-
-rotatingAxisInfo                  // information for rotatingAxisMotion motion model 
-{
-    rotAxis 
-    {
-        p1    (0.0 0.0 0.0);      // first point for the axis of rotation    
-        
-        p2    (0.0 0.0 1.0);      // second point for the axis of rotation    
-        
-        omega 1.256;              // rotation speed (rad/s) => 12 rpm
-    }
-}
-
-surfaces
-{
-    cylinder
-    {
-        type        cylinderWall;          // type of the wall
-        
-        p1          (0.0 0.0 0.0);         // begin point of cylinder axis
-           
-        p2          (0.0 0.0 0.8);         // end point of cylinder axis
-        
-        radius1     0.2;                   // radius at p1
-        
-        radius2     0.2;                   // radius at p2
-        
-        resolution  24;                    // number of divisions
-        
-        material    wallMat;               // material name of this wall
-        
-        motion      rotAxis;               // motion component name 
-    }
-
-    /*
-        This is a plane wall at the rear end of cylinder
-    */
-    
-    wall1
-    {
-        type      planeWall;               // type of the wall  
-        
-        p1        (-0.2 -0.2 0.0);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.0);         // second point
-        
-        p3        ( 0.2  0.2 0.0);         // third point
-        
-        p4        (-0.2  0.2 0.0);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-
-    /*
-        This is a plane wall at the front end of cylinder
-    */
-    
-    wall2
-    {
-        type      planeWall;               // type of the wall
-        
-        p1        (-0.2 -0.2 0.8);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.8);         // second point
-        
-        p3        ( 0.2  0.2 0.8);         // third point
-        
-        p4        (-0.2  0.2 0.8);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_250kParticles/settings/particlesDict

@@ -1,47 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     particlesDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-setFields
-{
-    defaultValue 
-    {
-        velocity         realx3     (0 0 0);     // linear velocity (m/s)
-        acceleration     realx3     (0 0 0);     // linear acceleration (m/s2)
-        rotVelocity      realx3     (0 0 0);     // rotational velocity (rad/s)
-        shapeName        word       glassBead;   // name of the particle shape 
-    }
-
-    selectors
-    {}
-}
-
-positionParticles
-{
-    method ordered;
-
-    orderedInfo
-    {
-        diameter   0.006;           // minimum space between centers of particles
-        
-        numPoints  250000;          // number of particles in the simulation 
-        
-        axisOrder  (z x y);         // axis order for filling the space with particles
-    }
-
-    regionType cylinder;            // other options: box and sphere    
-
-    cylinderInfo                    // cylinder for positioning particles 
-    {
-        p1     (0.0  0.0  0.01);    // lower corner point of the box 
-        
-        p2     (0.0  0.0  0.79);    // upper corner point of the box 
-        
-        radius 0.195;               // radius of cylinder 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_250kParticles/settings/settingsDict

@@ -1,34 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName    settingsDict;
-objectType    dictionary;
-fileFormat    ASCII;
-/*---------------------------------------------------------------------------*/
-run             rotatingDrum_250KParticles;
-
-dt              0.00001;      // time step for integration (s)
-
-startTime       0;            // start time for simulation 
-
-endTime         4;           // end time for simulation 
-
-saveInterval    0.2;          // time interval for saving the simulation
-
-timePrecision   5;            // maximum number of digits for time folder 
-
-g               (0 -9.8 0);   // gravity vector (m/s2) 
-
-includeObjects (diameter);                     // save necessary (i.e., required) data on disk
-
-// exclude unnecessary data from saving on disk
-excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); 
-
-integrationMethod         AdamsBashforth2;     // integration method 
-
-writeFormat               binary;              // data writting format (ascii or binary)
-
-timersReport              Yes;      
-
-timersReportInterval      0.01;    

benchmarks/rotatingDrum/rotatingDrum_2mParticles/caseSetup/interaction

@@ -1,60 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     interaction;
-objectType     dictionary;
-fileFormat     ASCII;
-
-/*---------------------------------------------------------------------------*/
-
-materials   (glassMat wallMat); // a list of materials names
-
-densities   (2500.0 2500);      // density of materials [kg/m3]
-
-contactListType   sortedContactList;
-
-contactSearch
-{
-    method         NBS;
-
-    updateInterval   20;
-
-    sizeRatio       1.1;
-
-    cellExtent     0.55;
-
-    adjustableBox   Yes;
-}
-
-model
-{
-    contactForceModel    nonLinearLimited;
-
-    rollingFrictionModel normal;
-    
-    /*
-       Property (glassMat-glassMat      glassMat-wallMat
-                                        wallMat-wallMat);
-    */
-
-    Yeff (1.0e6  1.0e6  
-                 1.0e6);                                    // Young modulus [Pa]
-   
-    Geff (0.8e6  0.8e6  
-                 0.8e6);                                    // Shear modulus [Pa]
-
-    nu   (0.25   0.25  
-                 0.25);                                     // Poisson's ratio [-]
-
-    en   (0.97   0.85   
-                 1.00);                                     // coefficient of normal restitution
-
-    mu   (0.65   0.65   
-                 0.65);                                     // dynamic friction 
-
-    mur  (0.1    0.1    
-                 0.1);                                      // rolling friction 
-}
-

benchmarks/rotatingDrum/rotatingDrum_2mParticles/caseSetup/shapes

@@ -1,15 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     shapes;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-
-names          (glassBead);    // names of shapes 
-
-diameters      (0.003);        // diameter of shapes 
-
-materials      (glassMat);     // material names for shapes 

benchmarks/rotatingDrum/rotatingDrum_2mParticles/cleanThisCase

@@ -1,7 +0,0 @@
-#!/bin/sh
-cd ${0%/*} || exit 1    # Run from this directory
-
-ls | grep -P "^(([0-9]+\.?[0-9]*)|(\.[0-9]+))$" | xargs -d"\n" rm -rf
-rm -rf VTK 
-
-#------------------------------------------------------------------------------

benchmarks/rotatingDrum/rotatingDrum_2mParticles/runThisCase

@@ -1,21 +0,0 @@
-#!/bin/sh
-cd ${0%/*} || exit 1    # Run from this directory
-echo "\n<--------------------------------------------------------------------->"
-echo "1) Creating particles"
-echo "<--------------------------------------------------------------------->\n"
-particlesPhasicFlow
-
-echo "\n<--------------------------------------------------------------------->"
-echo "2) Creating geometry"
-echo "<--------------------------------------------------------------------->\n"
-geometryPhasicFlow
-
-echo "\n<--------------------------------------------------------------------->"
-echo "3) Running the case"
-echo "<--------------------------------------------------------------------->\n"
-sphereGranFlow
-
-
-
-
-#------------------------------------------------------------------------------

benchmarks/rotatingDrum/rotatingDrum_2mParticles/settings/domainDict

@@ -1,50 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName     domainDict;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-globalBox                                        // Simulation domain: every particles that goes outside this domain will be deleted
-{
-    min (-0.2 -0.2  0.0);
-    max ( 0.2  0.2  1.2);
-}
-
-boundaries
-{
-    neighborListUpdateInterval 200;
-    
-    updateInterval              20;
-    
-    left
-    {
-        type    exit;                            // other options: periodic, reflective 
-    }
-
-    right
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    bottom
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    top
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    rear
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    front
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_2mParticles/settings/geometryDict

@@ -1,86 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     geometryDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-motionModel rotatingAxis;         // motion model: rotating object around an axis
-
-rotatingAxisInfo                  // information for rotatingAxisMotion motion model 
-{
-    rotAxis 
-    {
-        p1    (0.0 0.0 0.0);      // first point for the axis of rotation    
-        
-        p2    (0.0 0.0 1.0);      // second point for the axis of rotation    
-        
-        omega 1.256;              // rotation speed (rad/s) => 12 rpm
-    }
-}
-
-surfaces
-{
-    cylinder
-    {
-        type        cylinderWall;          // type of the wall
-        
-        p1          (0.0 0.0 0.0);         // begin point of cylinder axis
-           
-        p2          (0.0 0.0 1.2);         // end point of cylinder axis
-        
-        radius1     0.2;                   // radius at p1
-        
-        radius2     0.2;                   // radius at p2
-        
-        resolution  24;                    // number of divisions
-        
-        material    wallMat;               // material name of this wall
-        
-        motion      rotAxis;               // motion component name 
-    }
-
-    /*
-        This is a plane wall at the rear end of cylinder
-    */
-    
-    wall1
-    {
-        type      planeWall;               // type of the wall  
-        
-        p1        (-0.2 -0.2 0.0);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.0);         // second point
-        
-        p3        ( 0.2  0.2 0.0);         // third point
-        
-        p4        (-0.2  0.2 0.0);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-
-    /*
-        This is a plane wall at the front end of cylinder
-    */
-    
-    wall2
-    {
-        type      planeWall;               // type of the wall
-        
-        p1        (-0.2 -0.2 1.2);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 1.2);         // second point
-        
-        p3        ( 0.2  0.2 1.2);         // third point
-        
-        p4        (-0.2  0.2 1.2);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_2mParticles/settings/particlesDict

@@ -1,47 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     particlesDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-setFields
-{
-    defaultValue 
-    {
-        velocity         realx3     (0 0 0);     // linear velocity (m/s)
-        acceleration     realx3     (0 0 0);     // linear acceleration (m/s2)
-        rotVelocity      realx3     (0 0 0);     // rotational velocity (rad/s)
-        shapeName        word       glassBead;   // name of the particle shape 
-    }
-
-    selectors
-    {}
-}
-
-positionParticles
-{
-    method ordered;
-
-    orderedInfo
-    {
-        diameter   0.003;           // minimum space between centers of particles
-        
-        numPoints  2000000;          // number of particles in the simulation 
-        
-        axisOrder  (z x y);         // axis order for filling the space with particles
-    }
-
-    regionType cylinder;            // other options: box and sphere    
-
-    cylinderInfo                    // cylinder for positioning particles 
-    {
-        p1     (0.0  0.0  0.01);    // lower corner point of the box 
-        
-        p2     (0.0  0.0  1.19);    // upper corner point of the box 
-        
-        radius 0.195;               // radius of cylinder 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_2mParticles/settings/settingsDict

@@ -1,34 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName    settingsDict;
-objectType    dictionary;
-fileFormat    ASCII;
-/*---------------------------------------------------------------------------*/
-run             rotatingDrum_2mParticles;
-
-dt              0.00001;      // time step for integration (s)
-
-startTime       0;            // start time for simulation 
-
-endTime         4;           // end time for simulation 
-
-saveInterval    0.2;          // time interval for saving the simulation
-
-timePrecision   5;            // maximum number of digits for time folder 
-
-g               (0 -9.8 0);   // gravity vector (m/s2) 
-
-includeObjects (diameter);                     // save necessary (i.e., required) data on disk
-
-// exclude unnecessary data from saving on disk
-excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); 
-
-integrationMethod         AdamsBashforth2;     // integration method 
-
-writeFormat               binary;              // data writting format (ascii or binary)
-
-timersReport              Yes;      
-
-timersReportInterval      0.01;    

benchmarks/rotatingDrum/rotatingDrum_4mParticles/caseSetup/interaction

@@ -1,60 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     interaction;
-objectType     dictionary;
-fileFormat     ASCII;
-
-/*---------------------------------------------------------------------------*/
-
-materials   (glassMat wallMat); // a list of materials names
-
-densities   (2500.0 2500);      // density of materials [kg/m3]
-
-contactListType   sortedContactList;
-
-contactSearch
-{
-    method         NBS;
-
-    updateInterval   20;
-
-    sizeRatio       1.1;
-
-    cellExtent     0.55;
-
-    adjustableBox   Yes;
-}
-
-model
-{
-    contactForceModel    nonLinearLimited;
-
-    rollingFrictionModel normal;
-    
-    /*
-       Property (glassMat-glassMat      glassMat-wallMat
-                                        wallMat-wallMat);
-    */
-
-    Yeff (1.0e6  1.0e6  
-                 1.0e6);                                    // Young modulus [Pa]
-   
-    Geff (0.8e6  0.8e6  
-                 0.8e6);                                    // Shear modulus [Pa]
-
-    nu   (0.25   0.25  
-                 0.25);                                     // Poisson's ratio [-]
-
-    en   (0.97   0.85   
-                 1.00);                                     // coefficient of normal restitution
-
-    mu   (0.65   0.65   
-                 0.65);                                     // dynamic friction 
-
-    mur  (0.1    0.1    
-                 0.1);                                      // rolling friction 
-}
-

benchmarks/rotatingDrum/rotatingDrum_4mParticles/caseSetup/shapes

@@ -1,15 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     shapes;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-
-names          (glassBead);    // names of shapes 
-
-diameters      (0.003);        // diameter of shapes 
-
-materials      (glassMat);     // material names for shapes 

benchmarks/rotatingDrum/rotatingDrum_4mParticles/cleanThisCase

@@ -1,7 +0,0 @@
-#!/bin/sh
-cd ${0%/*} || exit 1    # Run from this directory
-
-ls | grep -P "^(([0-9]+\.?[0-9]*)|(\.[0-9]+))$" | xargs -d"\n" rm -rf
-rm -rf VTK 
-
-#------------------------------------------------------------------------------

benchmarks/rotatingDrum/rotatingDrum_4mParticles/runThisCase

@@ -1,21 +0,0 @@
-#!/bin/sh
-cd ${0%/*} || exit 1    # Run from this directory
-echo "\n<--------------------------------------------------------------------->"
-echo "1) Creating particles"
-echo "<--------------------------------------------------------------------->\n"
-particlesPhasicFlow
-
-echo "\n<--------------------------------------------------------------------->"
-echo "2) Creating geometry"
-echo "<--------------------------------------------------------------------->\n"
-geometryPhasicFlow
-
-echo "\n<--------------------------------------------------------------------->"
-echo "3) Running the case"
-echo "<--------------------------------------------------------------------->\n"
-sphereGranFlow
-
-
-
-
-#------------------------------------------------------------------------------

benchmarks/rotatingDrum/rotatingDrum_4mParticles/settings/domainDict

@@ -1,50 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName     domainDict;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-globalBox                                        // Simulation domain: every particles that goes outside this domain will be deleted
-{
-    min (-0.2 -0.2  0.0);
-    max ( 0.2  0.2  1.6);
-}
-
-boundaries
-{
-    neighborListUpdateInterval 200;
-    
-    updateInterval              20;
-    
-    left
-    {
-        type    exit;                            // other options: periodic, reflective 
-    }
-
-    right
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    bottom
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    top
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    rear
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    front
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_4mParticles/settings/geometryDict

@@ -1,86 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     geometryDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-motionModel rotatingAxis;         // motion model: rotating object around an axis
-
-rotatingAxisInfo                  // information for rotatingAxisMotion motion model 
-{
-    rotAxis 
-    {
-        p1    (0.0 0.0 0.0);      // first point for the axis of rotation    
-        
-        p2    (0.0 0.0 1.0);      // second point for the axis of rotation    
-        
-        omega 1.256;              // rotation speed (rad/s) => 12 rpm
-    }
-}
-
-surfaces
-{
-    cylinder
-    {
-        type        cylinderWall;          // type of the wall
-        
-        p1          (0.0 0.0 0.0);         // begin point of cylinder axis
-           
-        p2          (0.0 0.0 1.6);         // end point of cylinder axis
-        
-        radius1     0.2;                   // radius at p1
-        
-        radius2     0.2;                   // radius at p2
-        
-        resolution  24;                    // number of divisions
-        
-        material    wallMat;               // material name of this wall
-        
-        motion      rotAxis;               // motion component name 
-    }
-
-    /*
-        This is a plane wall at the rear end of cylinder
-    */
-    
-    wall1
-    {
-        type      planeWall;               // type of the wall  
-        
-        p1        (-0.2 -0.2 0.0);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.0);         // second point
-        
-        p3        ( 0.2  0.2 0.0);         // third point
-        
-        p4        (-0.2  0.2 0.0);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-
-    /*
-        This is a plane wall at the front end of cylinder
-    */
-    
-    wall2
-    {
-        type      planeWall;               // type of the wall
-        
-        p1        (-0.2 -0.2 1.6);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 1.6);         // second point
-        
-        p3        ( 0.2  0.2 1.6);         // third point
-        
-        p4        (-0.2  0.2 1.6);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_4mParticles/settings/particlesDict

@@ -1,47 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     particlesDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-setFields
-{
-    defaultValue 
-    {
-        velocity         realx3     (0 0 0);     // linear velocity (m/s)
-        acceleration     realx3     (0 0 0);     // linear acceleration (m/s2)
-        rotVelocity      realx3     (0 0 0);     // rotational velocity (rad/s)
-        shapeName        word       glassBead;   // name of the particle shape 
-    }
-
-    selectors
-    {}
-}
-
-positionParticles
-{
-    method ordered;
-
-    orderedInfo
-    {
-        diameter   0.003;           // minimum space between centers of particles
-        
-        numPoints  4000000;          // number of particles in the simulation 
-        
-        axisOrder  (z x y);         // axis order for filling the space with particles
-    }
-
-    regionType cylinder;            // other options: box and sphere    
-
-    cylinderInfo                    // cylinder for positioning particles 
-    {
-        p1     (0.0  0.0  0.01);    // lower corner point of the box 
-        
-        p2     (0.0  0.0  1.59);    // upper corner point of the box 
-        
-        radius 0.195;               // radius of cylinder 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_4mParticles/settings/settingsDict

@@ -1,34 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName    settingsDict;
-objectType    dictionary;
-fileFormat    ASCII;
-/*---------------------------------------------------------------------------*/
-run             rotatingDrum_4mParticles;
-
-dt              0.00001;      // time step for integration (s)
-
-startTime       0;            // start time for simulation 
-
-endTime         4;           // end time for simulation 
-
-saveInterval    0.2;          // time interval for saving the simulation
-
-timePrecision   5;            // maximum number of digits for time folder 
-
-g               (0 -9.8 0);   // gravity vector (m/s2) 
-
-includeObjects (diameter);                     // save necessary (i.e., required) data on disk
-
-// exclude unnecessary data from saving on disk
-excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); 
-
-integrationMethod         AdamsBashforth2;     // integration method 
-
-writeFormat               binary;              // data writting format (ascii or binary)
-
-timersReport              Yes;      
-
-timersReportInterval      0.01;    

benchmarks/rotatingDrum/rotatingDrum_500kParticles/caseSetup/interaction

@@ -1,60 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     interaction;
-objectType     dictionary;
-fileFormat     ASCII;
-
-/*---------------------------------------------------------------------------*/
-
-materials   (glassMat wallMat); // a list of materials names
-
-densities   (2500.0 2500);      // density of materials [kg/m3]
-
-contactListType   sortedContactList;
-
-contactSearch
-{
-    method         NBS;
-
-    updateInterval   20;
-
-    sizeRatio       1.1;
-
-    cellExtent     0.55;
-
-    adjustableBox   Yes;
-}
-
-model
-{
-    contactForceModel    nonLinearLimited;
-
-    rollingFrictionModel normal;
-    
-    /*
-       Property (glassMat-glassMat      glassMat-wallMat
-                                        wallMat-wallMat);
-    */
-
-    Yeff (1.0e6  1.0e6  
-                 1.0e6);                                    // Young modulus [Pa]
-   
-    Geff (0.8e6  0.8e6  
-                 0.8e6);                                    // Shear modulus [Pa]
-
-    nu   (0.25   0.25  
-                 0.25);                                     // Poisson's ratio [-]
-
-    en   (0.97   0.85   
-                 1.00);                                     // coefficient of normal restitution
-
-    mu   (0.65   0.65   
-                 0.65);                                     // dynamic friction 
-
-    mur  (0.1    0.1    
-                 0.1);                                      // rolling friction 
-}
-

benchmarks/rotatingDrum/rotatingDrum_500kParticles/caseSetup/shapes

@@ -1,15 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     shapes;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-
-names          (glassBead);    // names of shapes 
-
-diameters      (0.005);        // diameter of shapes 
-
-materials      (glassMat);     // material names for shapes 

benchmarks/rotatingDrum/rotatingDrum_500kParticles/cleanThisCase

@@ -1,7 +0,0 @@
-#!/bin/sh
-cd ${0%/*} || exit 1    # Run from this directory
-
-ls | grep -P "^(([0-9]+\.?[0-9]*)|(\.[0-9]+))$" | xargs -d"\n" rm -rf
-rm -rf VTK 
-
-#------------------------------------------------------------------------------

benchmarks/rotatingDrum/rotatingDrum_500kParticles/runThisCase

@@ -1,21 +0,0 @@
-#!/bin/sh
-cd ${0%/*} || exit 1    # Run from this directory
-echo "\n<--------------------------------------------------------------------->"
-echo "1) Creating particles"
-echo "<--------------------------------------------------------------------->\n"
-particlesPhasicFlow
-
-echo "\n<--------------------------------------------------------------------->"
-echo "2) Creating geometry"
-echo "<--------------------------------------------------------------------->\n"
-geometryPhasicFlow
-
-echo "\n<--------------------------------------------------------------------->"
-echo "3) Running the case"
-echo "<--------------------------------------------------------------------->\n"
-sphereGranFlow
-
-
-
-
-#------------------------------------------------------------------------------

benchmarks/rotatingDrum/rotatingDrum_500kParticles/settings/domainDict

@@ -1,50 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName     domainDict;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-globalBox                                        // Simulation domain: every particles that goes outside this domain will be deleted
-{
-    min (-0.2 -0.2  0.0);
-    max ( 0.2  0.2  0.8);
-}
-
-boundaries
-{
-    neighborListUpdateInterval 200;
-    
-    updateInterval              20;
-    
-    left
-    {
-        type    exit;                            // other options: periodic, reflective 
-    }
-
-    right
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    bottom
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    top
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    rear
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    front
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_500kParticles/settings/geometryDict

@@ -1,86 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     geometryDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-motionModel rotatingAxis;         // motion model: rotating object around an axis
-
-rotatingAxisInfo                  // information for rotatingAxisMotion motion model 
-{
-    rotAxis 
-    {
-        p1    (0.0 0.0 0.0);      // first point for the axis of rotation    
-        
-        p2    (0.0 0.0 1.0);      // second point for the axis of rotation    
-        
-        omega 1.256;              // rotation speed (rad/s) => 12 rpm
-    }
-}
-
-surfaces
-{
-    cylinder
-    {
-        type        cylinderWall;          // type of the wall
-        
-        p1          (0.0 0.0 0.0);         // begin point of cylinder axis
-           
-        p2          (0.0 0.0 0.8);         // end point of cylinder axis
-        
-        radius1     0.2;                   // radius at p1
-        
-        radius2     0.2;                   // radius at p2
-        
-        resolution  24;                    // number of divisions
-        
-        material    wallMat;               // material name of this wall
-        
-        motion      rotAxis;               // motion component name 
-    }
-
-    /*
-        This is a plane wall at the rear end of cylinder
-    */
-    
-    wall1
-    {
-        type      planeWall;               // type of the wall  
-        
-        p1        (-0.2 -0.2 0.0);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.0);         // second point
-        
-        p3        ( 0.2  0.2 0.0);         // third point
-        
-        p4        (-0.2  0.2 0.0);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-
-    /*
-        This is a plane wall at the front end of cylinder
-    */
-    
-    wall2
-    {
-        type      planeWall;               // type of the wall
-        
-        p1        (-0.2 -0.2 0.8);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.8);         // second point
-        
-        p3        ( 0.2  0.2 0.8);         // third point
-        
-        p4        (-0.2  0.2 0.8);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_500kParticles/settings/particlesDict

@@ -1,47 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     particlesDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-setFields
-{
-    defaultValue 
-    {
-        velocity         realx3     (0 0 0);     // linear velocity (m/s)
-        acceleration     realx3     (0 0 0);     // linear acceleration (m/s2)
-        rotVelocity      realx3     (0 0 0);     // rotational velocity (rad/s)
-        shapeName        word       glassBead;   // name of the particle shape 
-    }
-
-    selectors
-    {}
-}
-
-positionParticles
-{
-    method ordered;
-
-    orderedInfo
-    {
-        diameter   0.005;           // minimum space between centers of particles
-        
-        numPoints  500000;          // number of particles in the simulation 
-        
-        axisOrder  (z x y);         // axis order for filling the space with particles
-    }
-
-    regionType cylinder;            // other options: box and sphere    
-
-    cylinderInfo                    // cylinder for positioning particles 
-    {
-        p1     (0.0  0.0  0.01);    // lower corner point of the box 
-        
-        p2     (0.0  0.0  0.79);    // upper corner point of the box 
-        
-        radius 0.195;               // radius of cylinder 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_500kParticles/settings/settingsDict

@@ -1,34 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName    settingsDict;
-objectType    dictionary;
-fileFormat    ASCII;
-/*---------------------------------------------------------------------------*/
-run             rotatingDrum_500KParticles;
-
-dt              0.00001;      // time step for integration (s)
-
-startTime       0;            // start time for simulation 
-
-endTime         4;           // end time for simulation 
-
-saveInterval    0.2;          // time interval for saving the simulation
-
-timePrecision   5;            // maximum number of digits for time folder 
-
-g               (0 -9.8 0);   // gravity vector (m/s2) 
-
-includeObjects (diameter);                     // save necessary (i.e., required) data on disk
-
-// exclude unnecessary data from saving on disk
-excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); 
-
-integrationMethod         AdamsBashforth2;     // integration method 
-
-writeFormat               binary;              // data writting format (ascii or binary)
-
-timersReport              Yes;      
-
-timersReportInterval      0.01;    

benchmarks/rotatingDrum/rotatingDrum_8mParticles/caseSetup/interaction

@@ -1,60 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     interaction;
-objectType     dictionary;
-fileFormat     ASCII;
-
-/*---------------------------------------------------------------------------*/
-
-materials   (glassMat wallMat); // a list of materials names
-
-densities   (2500.0 2500);      // density of materials [kg/m3]
-
-contactListType   sortedContactList;
-
-contactSearch
-{
-    method         NBS;
-
-    updateInterval   20;
-
-    sizeRatio       1.1;
-
-    cellExtent     0.55;
-
-    adjustableBox   Yes;
-}
-
-model
-{
-    contactForceModel    nonLinearLimited;
-
-    rollingFrictionModel normal;
-    
-    /*
-       Property (glassMat-glassMat      glassMat-wallMat
-                                        wallMat-wallMat);
-    */
-
-    Yeff (1.0e6  1.0e6  
-                 1.0e6);                                    // Young modulus [Pa]
-   
-    Geff (0.8e6  0.8e6  
-                 0.8e6);                                    // Shear modulus [Pa]
-
-    nu   (0.25   0.25  
-                 0.25);                                     // Poisson's ratio [-]
-
-    en   (0.97   0.85   
-                 1.00);                                     // coefficient of normal restitution
-
-    mu   (0.65   0.65   
-                 0.65);                                     // dynamic friction 
-
-    mur  (0.1    0.1    
-                 0.1);                                      // rolling friction 
-}
-

benchmarks/rotatingDrum/rotatingDrum_8mParticles/caseSetup/shapes

@@ -1,15 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */ 
-
-objectName     shapes;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-
-names          (glassBead);    // names of shapes 
-
-diameters      (0.002);        // diameter of shapes 
-
-materials      (glassMat);     // material names for shapes 

benchmarks/rotatingDrum/rotatingDrum_8mParticles/cleanThisCase

@@ -1,7 +0,0 @@
-#!/bin/sh
-cd ${0%/*} || exit 1    # Run from this directory
-
-ls | grep -P "^(([0-9]+\.?[0-9]*)|(\.[0-9]+))$" | xargs -d"\n" rm -rf
-rm -rf VTK 
-
-#------------------------------------------------------------------------------

benchmarks/rotatingDrum/rotatingDrum_8mParticles/runThisCase

@@ -1,21 +0,0 @@
-#!/bin/sh
-cd ${0%/*} || exit 1    # Run from this directory
-echo "\n<--------------------------------------------------------------------->"
-echo "1) Creating particles"
-echo "<--------------------------------------------------------------------->\n"
-particlesPhasicFlow
-
-echo "\n<--------------------------------------------------------------------->"
-echo "2) Creating geometry"
-echo "<--------------------------------------------------------------------->\n"
-geometryPhasicFlow
-
-echo "\n<--------------------------------------------------------------------->"
-echo "3) Running the case"
-echo "<--------------------------------------------------------------------->\n"
-sphereGranFlow
-
-
-
-
-#------------------------------------------------------------------------------

benchmarks/rotatingDrum/rotatingDrum_8mParticles/settings/domainDict

@@ -1,50 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName     domainDict;
-objectType     dictionary;
-fileFormat     ASCII;
-/*---------------------------------------------------------------------------*/
-globalBox                                        // Simulation domain: every particles that goes outside this domain will be deleted
-{
-    min (-0.2 -0.2  0.0);
-    max ( 0.2  0.2  1.6);
-}
-
-boundaries
-{
-    neighborListUpdateInterval 200;
-    
-    updateInterval              20;
-    
-    left
-    {
-        type    exit;                            // other options: periodic, reflective 
-    }
-
-    right
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    bottom
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    top
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    rear
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-
-    front
-    {
-        type     exit;                           // other options: periodic, reflective 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_8mParticles/settings/geometryDict

@@ -1,86 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     geometryDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-motionModel rotatingAxis;         // motion model: rotating object around an axis
-
-rotatingAxisInfo                  // information for rotatingAxisMotion motion model 
-{
-    rotAxis 
-    {
-        p1    (0.0 0.0 0.0);      // first point for the axis of rotation    
-        
-        p2    (0.0 0.0 1.0);      // second point for the axis of rotation    
-        
-        omega 1.256;              // rotation speed (rad/s) => 12 rpm
-    }
-}
-
-surfaces
-{
-    cylinder
-    {
-        type        cylinderWall;          // type of the wall
-        
-        p1          (0.0 0.0 0.0);         // begin point of cylinder axis
-           
-        p2          (0.0 0.0 1.6);         // end point of cylinder axis
-        
-        radius1     0.2;                   // radius at p1
-        
-        radius2     0.2;                   // radius at p2
-        
-        resolution  24;                    // number of divisions
-        
-        material    wallMat;               // material name of this wall
-        
-        motion      rotAxis;               // motion component name 
-    }
-
-    /*
-        This is a plane wall at the rear end of cylinder
-    */
-    
-    wall1
-    {
-        type      planeWall;               // type of the wall  
-        
-        p1        (-0.2 -0.2 0.0);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 0.0);         // second point
-        
-        p3        ( 0.2  0.2 0.0);         // third point
-        
-        p4        (-0.2  0.2 0.0);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-
-    /*
-        This is a plane wall at the front end of cylinder
-    */
-    
-    wall2
-    {
-        type      planeWall;               // type of the wall
-        
-        p1        (-0.2 -0.2 1.6);         // first point of the wall
-        
-        p2        ( 0.2 -0.2 1.6);         // second point
-        
-        p3        ( 0.2  0.2 1.6);         // third point
-        
-        p4        (-0.2  0.2 1.6);         // fourth point 
-        
-        material  wallMat;                 // material name of the wall  
-        
-        motion    rotAxis;                 // motion component name 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_8mParticles/settings/particlesDict

@@ -1,47 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-
-objectName     particlesDict;
-objectType     dictionary;
-fileFormat     ASCII;
-
-setFields
-{
-    defaultValue 
-    {
-        velocity         realx3     (0 0 0);     // linear velocity (m/s)
-        acceleration     realx3     (0 0 0);     // linear acceleration (m/s2)
-        rotVelocity      realx3     (0 0 0);     // rotational velocity (rad/s)
-        shapeName        word       glassBead;   // name of the particle shape 
-    }
-
-    selectors
-    {}
-}
-
-positionParticles
-{
-    method ordered;
-
-    orderedInfo
-    {
-        diameter   0.003;           // minimum space between centers of particles
-        
-        numPoints  6000000;          // number of particles in the simulation 
-        
-        axisOrder  (z x y);         // axis order for filling the space with particles
-    }
-
-    regionType cylinder;            // other options: box and sphere    
-
-    cylinderInfo                    // cylinder for positioning particles 
-    {
-        p1     (0.0  0.0  0.01);    // lower corner point of the box 
-        
-        p2     (0.0  0.0  1.59);    // upper corner point of the box 
-        
-        radius 0.195;               // radius of cylinder 
-    }
-}

benchmarks/rotatingDrum/rotatingDrum_8mParticles/settings/settingsDict

@@ -1,34 +0,0 @@
-/* -------------------------------*- C++ -*--------------------------------- *\ 
-|  phasicFlow File                                                            | 
-|  copyright: www.cemf.ir                                                     | 
-\* ------------------------------------------------------------------------- */  
-objectName    settingsDict;
-objectType    dictionary;
-fileFormat    ASCII;
-/*---------------------------------------------------------------------------*/
-run             rotatingDrum_4mParticles;
-
-dt              0.00001;      // time step for integration (s)
-
-startTime       0;            // start time for simulation 
-
-endTime         4;           // end time for simulation 
-
-saveInterval    0.2;          // time interval for saving the simulation
-
-timePrecision   5;            // maximum number of digits for time folder 
-
-g               (0 -9.8 0);   // gravity vector (m/s2) 
-
-includeObjects (diameter);                     // save necessary (i.e., required) data on disk
-
-// exclude unnecessary data from saving on disk
-excludeObjects (rVelocity.dy1 pStructPosition.dy1 pStructVelocity.dy1); 
-
-integrationMethod         AdamsBashforth2;     // integration method 
-
-writeFormat               binary;              // data writting format (ascii or binary)
-
-timersReport              Yes;      
-
-timersReportInterval      0.01;    

benchmarks/rotatingDrum_4MParticles/caseSetup/interaction

@@ -0,0 +1,59 @@
+/* -------------------------------*- C++ -*--------------------------------- *\ 
+|  phasicFlow File                                                            | 
+|  copyright: www.cemf.ir                                                     | 
+\* ------------------------------------------------------------------------- */ 
+
+objectName interaction;
+objectType dicrionary;
+
+materials   (glassMat wallMat); // a list of materials names
+densities   (2500.0 2500);      // density of materials [kg/m3]
+
+contactListType   sortedContactList;
+
+model
+{
+   contactForceModel nonLinearLimited;
+   rollingFrictionModel normal;
+
+   Yeff (1.0e6 1.0e6  // Young modulus [Pa]
+               1.0e6);
+   
+   Geff (0.8e6 0.8e6  // Shear modulus [Pa]
+               0.8e6);
+
+   nu    (0.25 0.25  // Poisson's ratio [-]
+               0.25);
+
+   en (0.97  0.85   // coefficient of normal restitution
+             1.00);
+
+   et (1.0   1.0    // coefficient of tangential restitution 
+             1.0);
+
+   mu (0.65  0.65   // dynamic friction 
+             0.65);
+
+   mur (0.1  0.1    // rolling friction 
+             0.1);
+        
+}
+
+contactSearch
+{
+   method         NBS;           
+   wallMapping    cellMapping;   
+
+   NBSInfo
+   {
+      updateFrequency 10;        // each 20 timesteps, update neighbor list 
+      sizeRatio      1.05;       // bounding box size to particle diameter (max)
+   }
+
+   cellMappingInfo
+   {
+      updateFrequency 10;        // each 20 timesteps, update neighbor list  
+      cellExtent     0.6;        // bounding box for particle-wall search (> 0.5)
+   }
+
+}

benchmarks/rotatingDrum_4MParticles/caseSetup/particleInsertion

@@ -0,0 +1,14 @@
+/* -------------------------------*- C++ -*--------------------------------- *\ 
+|  phasicFlow File                                                            | 
+|  copyright: www.cemf.ir                                                     | 
+\* ------------------------------------------------------------------------- */ 
+
+objectName particleInsertion;
+objectType dicrionary;
+
+
+active  no;          // is insertion active?
+
+collisionCheck No;   // not implemented for yes
+
+

benchmarks/rotatingDrum_4MParticles/caseSetup/sphereShape

@@ -0,0 +1,11 @@
+/* -------------------------------*- C++ -*--------------------------------- *\ 
+|  phasicFlow File                                                            | 
+|  copyright: www.cemf.ir                                                     | 
+\* ------------------------------------------------------------------------- */ 
+
+objectName 	sphereDict;
+objectType 	sphereShape;
+
+names 		(glassBead); 	// names of shapes 
+diameters 	(0.003);		// diameter of shapes 
+materials	(glassMat);		// material names for shapes 

benchmarks/rotatingDrum_4MParticles/settings/geometryDict

@@ -0,0 +1,63 @@
+/* -------------------------------*- C++ -*--------------------------------- *\ 
+|  phasicFlow File                                                            | 
+|  copyright: www.cemf.ir                                                     | 
+\* ------------------------------------------------------------------------- */  
+
+objectName 	geometryDict;
+objectType 	dictionary;
+
+motionModel rotatingAxisMotion; 
+
+surfaces
+{
+	
+	cylinder
+	{
+		type cylinderWall;  
+		p1 (0.0 0.0 0.0);   
+		p2 (0.0 0.0 1.6);  
+		radius1 0.2;		
+		radius2 0.2;		
+		resolution 24;      
+		material wallMat;   
+		motion rotAxis;
+	}
+
+	
+	wall1
+	{
+		type planeWall;			
+		p1 (-0.2 -0.2 0.0);	
+		p2 ( 0.2 -0.2 0.0);   
+		p3 ( 0.2  0.2 0.0);   
+		p4 (-0.2  0.2 0.0);   
+		material wallMat;     
+		motion rotAxis;		
+	}
+
+	/*
+	This is a plane wall at the front end of cylinder
+	*/
+	wall2
+	{
+		type planeWall;
+		p1 (-0.2 -0.2 1.6);
+		p2 ( 0.2 -0.2 1.6);
+		p3 ( 0.2  0.2 1.6);
+		p4 (-0.2  0.2 1.6);
+		material wallMat;
+		motion rotAxis;
+	}
+		
+}
+
+// information for rotatingAxisMotion motion model 
+rotatingAxisMotionInfo
+{
+	rotAxis 
+	{
+		p1 (0.0 0.0 0.0);	
+		p2 (0.0 0.0 1.0);	
+		omega 1.256; 		// rotation speed (rad/s) => 12 rpm
+	}
+}

benchmarks/rotatingDrum_4MParticles/settings/particlesDict

@@ -0,0 +1,44 @@
+/* -------------------------------*- C++ -*--------------------------------- *\ 
+|  phasicFlow File                                                            | 
+|  copyright: www.cemf.ir                                                     | 
+\* ------------------------------------------------------------------------- */  
+
+objectName 	particlesDict;
+objectType 	dictionary;
+
+setFields
+{
+	
+	defaultValue 
+	{
+		velocity 		realx3 	(0 0 0); // linear velocity (m/s)
+		acceleration 	realx3 	(0 0 0); // linear acceleration (m/s2)
+		rotVelocity 	realx3 	(0 0 0); // rotational velocity (rad/s)
+		shapeName 		word	glassBead; // name of the particle shape 
+	}
+
+	selectors
+	{}
+}
+
+positionParticles
+{
+	method positionOrdered;     		
+
+	maxNumberOfParticles 	4000001; 
+	mortonSorting 			Yes;    
+
+	cylinder  // box for positioning particles 
+	{
+		p1 ( 0.0  0.0 0.01);    // lower corner point of the box 
+		p2 ( 0.0  0.0 1.59);	// upper corner point of the box 
+		radius 0.195;
+	}
+	
+	positionOrderedInfo
+	{
+		diameter 0.003; 	// minimum space between centers of particles
+		numPoints 4000000; 	// number of particles in the simulation 
+		axisOrder (z x y);  // axis order for filling the space with particles
+	}
+}

benchmarks/rotatingDrum_4MParticles/settings/settingsDict

@@ -0,0 +1,32 @@
+/* -------------------------------*- C++ -*--------------------------------- *\ 
+|  phasicFlow File                                                            | 
+|  copyright: www.cemf.ir                                                     | 
+\* ------------------------------------------------------------------------- */  
+objectName 	settingsDict;
+objectType 	dictionary;;
+
+run 			rotatingDrum_1;
+
+dt 				0.00001; 	// time step for integration (s)
+
+startTime 		0; 			// start time for simulation 
+
+endTime 		10; 		// end time for simulation 
+
+saveInterval 	0.2; 		// time interval for saving the simulation
+
+timePrecision   5;			// maximum number of digits for time folder 
+
+g 				(0 -9.8 0); // gravity vector (m/s2) 
+
+domain 
+{
+	min (-0.2 -0.2 -0.0);
+	max ( 0.2  0.2  1.6);
+}
+
+integrationMethod 		AdamsBashforth3; 	// integration method 
+
+timersReport 			Yes;  	
+
+timersReportInterval   	0.01;	

cmake/autoComplete

@@ -1,96 +1,17 @@
 PF_cFlags="--description --help --version"
-AllTimeFolders=
-__getAllTime(){
-    # Initialize empty array for time folders
-    local time_folders=()
-    
-    # Loop through all directories in current folder
-    for dir in */; do
-        # Remove trailing slash
-        dir=${dir%/}
-        
-        # Check if directory name is a valid floating point number
-        # This pattern matches integers and floating point numbers
-        if [[ $dir =~ ^[0-9]+(\.[0-9]+)?$ ]]; then
-            time_folders+=("$dir")
-        fi
-    done
-    
-    # Set completion reply to the time folders
-    COMPREPLY=("${time_folders[@]}")
-    AllTimeFolders="${time_folders[@]}"
-}
-
-__getFields(){
-    __getAllTime
-    local -A unique_files=()
-    # Files to exclude from suggestions
-    local exclude_files=("shapeHash" "pStructure" "particleInsertion" "p" "alpha" "U" "Sp" "Su" "phi")
-    declare -A exclude_dict
-    
-    # Build exclude dictionary for faster lookups
-    for file in "${exclude_files[@]}"; do
-        exclude_dict["$file"]=1
-    done
-
-    for dir in $AllTimeFolders; do
-        # Skip if not a directory
-        [ ! -d "$dir" ] && continue
-        
-        # Find all files in this time directory
-        while IFS= read -r filename; do
-            # Skip empty lines and excluded files
-            [ -z "$filename" ] || [ "${exclude_dict[$filename]+exists}" ] && continue
-            
-            # Add to unique files
-            unique_files["$filename"]=1
-        done < <(find "$dir" -maxdepth 1 -type f -printf '%f\n')
-    done
-    
-    # Set completion reply to the unique filenames
-    COMPREPLY=(${!unique_files[@]})
-    
-    # Clear global variable
-    AllTimeFolders=
-}
 
 _pFlowToVTK(){
-    local cur="${COMP_WORDS[COMP_CWORD]}"
+    if [ "$3" == "--time" ]; then
-    local prev="${COMP_WORDS[COMP_CWORD-1]}"
+      COMPREPLY=( $(ls) )
-    
-    # Check if we're completing a field
-    local is_field=0
-    for ((i=1; i<COMP_CWORD; i++)); do
-        if [[ "${COMP_WORDS[i]}" == "--fields" ]]; then
-            is_field=1
-            break
-        fi
-    done
-    
-    if [ "$prev" == "--time" ]; then
-        __getAllTime
-    elif [ "$prev" == "--fields" ] || [ $is_field -eq 1 ]; then 
-        # We're completing field names
-        __getFields
-        # Filter the results based on the current word prefix
-        if [ -n "$cur" ]; then
-            local filtered=()
-            for item in "${COMPREPLY[@]}"; do
-                if [[ "$item" == "$cur"* ]]; then
-                    filtered+=("$item")
-                fi
-            done
-            COMPREPLY=("${filtered[@]}")
-        fi
     else
-        COMPREPLY=( $(compgen -W "$PF_cFlags --binary --no-geometry --no-particles --out-folder --time --separate-surfaces --fields" -- "$cur") )
+      COMPREPLY=( $(compgen -W "$PF_cFlags --binary --no-geometry --no-particles --out-folder --time --separate-surfaces --fields" -- "$2") )
     fi
 }
 complete -F _pFlowToVTK pFlowToVTK
 
 _postprocessPhasicFlow(){
     if [ "$3" == "--time" ]; then
-      __getAllTime
+      COMPREPLY=( $(ls) )
     else
       COMPREPLY=( $(compgen -W "$PF_cFlags --out-folder --time --zeroFolder" -- "$2") )
     fi

cmake/preReq.cmake

@@ -1,54 +0,0 @@
-if(pFlow_STD_Parallel_Alg)
-    # Check if libtbb-dev is installed
-    execute_process(
-        COMMAND dpkg -s libtbb-dev
-        RESULT_VARIABLE TBB_IS_INSTALLED
-        OUTPUT_QUIET
-        ERROR_QUIET)
-
-    if(NOT TBB_IS_INSTALLED EQUAL 0)
-        message(STATUS "libtbb-dev not found. Installing libtbb-dev...")
-        execute_process(
-            COMMAND sudo apt-get update
-            COMMAND sudo apt-get install -y libtbb-dev
-            RESULT_VARIABLE TBB_INSTALL_RESULT)
-            
-        if(NOT TBB_INSTALL_RESULT EQUAL 0)
-            message(FATAL_ERROR "Failed to install libtbb-dev")
-        endif()
-    else()
-        message(STATUS "libtbb-dev is already installed.")
-    endif()
-endif()
-
-
-# Kokkos folder creation 
-set(Kokkos_Source_DIR $ENV{HOME}/Kokkos/kokkos)
-
-if(NOT EXISTS "${Kokkos_Source_DIR}/CMakeLists.txt")
-
-    # Check CMake version and set policy CMP0169 if CMake version is 3.30 or higher
-    if(${CMAKE_VERSION} VERSION_GREATER_EQUAL "3.30")
-        cmake_policy(SET CMP0169 OLD)
-    endif()
-
-    include(FetchContent)
-    FetchContent_Declare(
-        kokkos
-        GIT_REPOSITORY https://github.com/kokkos/kokkos.git
-        GIT_TAG 4.4.01
-    )
-    
-    FetchContent_GetProperties(kokkos)
-    if(NOT kokkos_POPULATED)
-        message(STATUS "Kokkos source directory not found. Downloading Kokkos version 4.4.1 ...")
-        FetchContent_Populate(kokkos)
-        set(Kokkos_Source_DIR ${kokkos_SOURCE_DIR})
-    endif()
-
-endif()
-
-message(STATUS "Kokkos source directory is ${Kokkos_Source_DIR}")
-add_subdirectory(${Kokkos_Source_DIR} ./kokkos)
-#Kokkos_cmake_settings()
-

doc/code-documentation/html/AB2Kernels_8hpp.html

@@ -0,0 +1,146 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml">
+<head>
+<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
+<meta http-equiv="X-UA-Compatible" content="IE=9"/>
+<meta name="generator" content="Doxygen 1.8.17"/>
+<meta name="description" content="PhasicFlow is an open-source parallel DEM (discrete element method) package for simulating granular flow. It is developed in C++ and can be exectued on both GPU (like CUDA) and CPU.">
+<title>PhasicFlow: src/Integration/AdamsBashforth2/AB2Kernels.hpp File Reference</title>
+<link href="tabs.css" rel="stylesheet" type="text/css"/>
+<script type="text/javascript" src="jquery.js"></script>
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+<script type="text/javascript" src="search/searchdata.js"></script>
+<script type="text/javascript" src="search/search.js"></script>
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+  $(document).ready(function() { init_search(); });
+/* @license-end */
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+<script type="text/x-mathjax-config">
+  MathJax.Hub.Config({
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+    jax: ["input/TeX","output/HTML-CSS"],
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+<script type="text/javascript" async="async" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js"></script>
+<link href="doxygen.css" rel="stylesheet" type="text/css" />
+<link href="customdoxygen.css" rel="stylesheet" type="text/css"/>
+</head>
+<body>
+<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
+<div id="titlearea">
+<table cellspacing="0" >
+ <tbody>
+ <tr>
+    <td id="projectlogo"><a href="https://github.com/PhasicFlow"><img alt="Logo" src="phasicFlow_logo.png"></a></td>
+   <td>        <div id="MSearchBox" class="MSearchBoxInactive">
+        <span class="left">
+          <img id="MSearchSelect" src="search/mag_sel.png"
+               onmouseover="return searchBox.OnSearchSelectShow()"
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+            <a id="MSearchClose" href="javascript:searchBox.CloseResultsWindow()"><img id="MSearchCloseImg" border="0" src="search/close.png" alt=""/></a>
+          </span>
+        </div>
+</td>
+ </tr>
+<tr>
+  <td id="projectbrief">
+    <a href="https://https://cemf.ir">www.cemf.ir</a>
+  </td>
+</tr>
+ </tbody>
+</table>
+</div>
+<!-- end header part -->
+<!-- Generated by Doxygen 1.8.17 -->
+<script type="text/javascript">
+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+var searchBox = new SearchBox("searchBox", "search",false,'Search');
+/* @license-end */
+</script>
+</div><!-- top -->
+<div id="side-nav" class="ui-resizable side-nav-resizable">
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+/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
+$(document).ready(function(){initNavTree('AB2Kernels_8hpp.html',''); initResizable(); });
+/* @license-end */
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+<!-- window showing the filter options -->
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+     onmouseover="return searchBox.OnSearchSelectShow()"
+     onmouseout="return searchBox.OnSearchSelectHide()"
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+<!-- iframe showing the search results (closed by default) -->
+<div id="MSearchResultsWindow">
+<iframe src="javascript:void(0)" frameborder="0" 
+        name="MSearchResults" id="MSearchResults">
+</iframe>
+</div>
+
+<div class="header">
+  <div class="summary">
+<a href="#namespaces">Namespaces</a> &#124;
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle">
+<div class="title">AB2Kernels.hpp File Reference</div>  </div>
+</div><!--header-->
+<div class="contents">
+<div class="textblock"><div id="dynsection-0" onclick="return toggleVisibility(this)" class="dynheader closed" style="cursor:pointer;">
+  <img id="dynsection-0-trigger" src="closed.png" alt="+"/> Include dependency graph for AB2Kernels.hpp:</div>
+<div id="dynsection-0-summary" class="dynsummary" style="display:block;">
+</div>
+<div id="dynsection-0-content" class="dyncontent" style="display:none;">
+<div class="center"><img src="AB2Kernels_8hpp__incl.png" border="0" usemap="#src_2Integration_2AdamsBashforth2_2AB2Kernels_8hpp" alt=""/></div>
+</div>
+</div>
+<p><a href="AB2Kernels_8hpp_source.html">Go to the source code of this file.</a></p>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="namespaces"></a>
+Namespaces</h2></td></tr>
+<tr class="memitem:namespacepFlow"><td class="memItemLeft" align="right" valign="top"> &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow.html">pFlow</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:namespacepFlow_1_1AB2Kernels"><td class="memItemLeft" align="right" valign="top"> &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow_1_1AB2Kernels.html">pFlow::AB2Kernels</a></td></tr>
+<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table><table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a1d3752d19417e5f211093381ef34cbc9"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow_1_1AB2Kernels.html#a1d3752d19417e5f211093381ef34cbc9">intAllActive</a> (const word &amp;name, real dt, rangeU32 activeRng, const deviceViewType1D&lt; realx3 &gt; &amp;y, const deviceViewType1D&lt; realx3 &gt; &amp;dy, const deviceViewType1D&lt; realx3 &gt; &amp;dy1)</td></tr>
+<tr class="separator:a1d3752d19417e5f211093381ef34cbc9"><td class="memSeparator" colspan="2">&#160;</td></tr>
+<tr class="memitem:a0e684a0c67df0388c9ab00a8abea55c4"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespacepFlow_1_1AB2Kernels.html#a0e684a0c67df0388c9ab00a8abea55c4">intScattered</a> (const word &amp;name, real dt, const pFlagTypeDevice &amp;activePoints, const deviceViewType1D&lt; realx3 &gt; &amp;y, const deviceViewType1D&lt; realx3 &gt; &amp;dy, const deviceViewType1D&lt; realx3 &gt; &amp;dy1)</td></tr>
+<tr class="separator:a0e684a0c67df0388c9ab00a8abea55c4"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+</div><!-- contents -->
+</div><!-- doc-content -->
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
+  <ul>
+    <li class="navelem"><a class="el" href="dir_68267d1309a1af8e8297ef4c3efbcdba.html">src</a></li><li class="navelem"><a class="el" href="dir_5ff0557589c78f704a7131791f9a8bc6.html">Integration</a></li><li class="navelem"><a class="el" href="dir_eb84e0c9bccf6469316a77378e4a6fe1.html">AdamsBashforth2</a></li><li class="navelem"><a class="el" href="AB2Kernels_8hpp.html">AB2Kernels.hpp</a></li>
+    <li class="footer">Generated by
+    <a href="http://www.doxygen.org/index.html">
+    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.17 </li>
+  </ul>
+</div>
+</body>
+</html>

doc/code-documentation/html/AB2Kernels_8hpp.js

@@ -0,0 +1,5 @@
+var AB2Kernels_8hpp =
+[
+    [ "intAllActive", "AB2Kernels_8hpp.html#a1d3752d19417e5f211093381ef34cbc9", null ],
+    [ "intScattered", "AB2Kernels_8hpp.html#a0e684a0c67df0388c9ab00a8abea55c4", null ]
+];

doc/code-documentation/html/AB2Kernels_8hpp__incl.dot

@@ -0,0 +1,11 @@
+digraph "src/Integration/AdamsBashforth2/AB2Kernels.hpp"
+{
+ // LATEX_PDF_SIZE
+  edge [fontname="Helvetica",fontsize="10",labelfontname="Helvetica",labelfontsize="10"];
+  node [fontname="Helvetica",fontsize="10",shape=record];
+  Node1 [label="src/Integration/AdamsBashforth2\l/AB2Kernels.hpp",height=0.2,width=0.4,color="black", fillcolor="grey75", style="filled", fontcolor="black",tooltip=" "];
+  Node1 -> Node2 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"];
+  Node2 [label="KokkosTypes.hpp",height=0.2,width=0.4,color="red", fillcolor="white", style="filled",URL="$KokkosTypes_8hpp.html",tooltip=" "];
+  Node1 -> Node9 [color="midnightblue",fontsize="10",style="solid",fontname="Helvetica"];
+  Node9 [label="types.hpp",height=0.2,width=0.4,color="red", fillcolor="white", style="filled",URL="$types_8hpp.html",tooltip=" "];
+}

doc/code-documentation/html/AB2Kernels_8hpp_source.html

@@ -0,0 +1,198 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+<div class="title">AB2Kernels.hpp</div>  </div>
+</div><!--header-->
+<div class="contents">
+<a href="AB2Kernels_8hpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160; </div>
+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160; </div>
+<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="preprocessor">#ifndef __AB2Kernels_hpp__</span></div>
+<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="preprocessor">#define __AB2Kernels_hpp__</span></div>
+<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160; </div>
+<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="KokkosTypes_8hpp.html">KokkosTypes.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="types_8hpp.html">types.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160; </div>
+<div class="line"><a name="l00009"></a><span class="lineno"><a class="line" href="namespacepFlow_1_1AB2Kernels.html">    9</a></span>&#160;<span class="keyword">namespace </span><a class="code" href="namespacepFlow_1_1AB2Kernels.html">pFlow::AB2Kernels</a></div>
+<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;{</div>
+<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="keyword">inline</span></div>
+<div class="line"><a name="l00012"></a><span class="lineno"><a class="line" href="namespacepFlow_1_1AB2Kernels.html#a1d3752d19417e5f211093381ef34cbc9">   12</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="namespacepFlow_1_1AB2Kernels.html#a1d3752d19417e5f211093381ef34cbc9">intAllActive</a>(</div>
+<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; name,</div>
+<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;    <a class="code" href="structpFlow_1_1Range.html">rangeU32</a> activeRng,</div>
+<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; y, </div>
+<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; dy,</div>
+<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; dy1</div>
+<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;)</div>
+<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;{</div>
+<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;        name,</div>
+<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;        <a class="code" href="namespacepFlow.html#a6ea32be3339f3023ab349c9c3775c916">deviceRPolicyStatic</a> (activeRng.<a class="code" href="structpFlow_1_1Range.html#a8ade4cd349991c4c7ed9131410ddd8f0">start</a>(), activeRng.<a class="code" href="structpFlow_1_1Range.html#a38ebf09d6bfa7f04d4a95ff7f0d3aef4">end</a>()),</div>
+<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">uint32</a> i){</div>
+<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;            y[i] +=  dt*(<span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(1.5) * dy[i] - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(0.5) * dy1[i]);</div>
+<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;            dy1[i] = dy[i];</div>
+<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;        });</div>
+<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;    Kokkos::fence();</div>
+<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160; </div>
+<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;    </div>
+<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;}</div>
+<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160; </div>
+<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="keyword">inline</span></div>
+<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="namespacepFlow_1_1AB2Kernels.html#a0e684a0c67df0388c9ab00a8abea55c4">intScattered</a></div>
+<div class="line"><a name="l00035"></a><span class="lineno"><a class="line" href="namespacepFlow_1_1AB2Kernels.html#a0e684a0c67df0388c9ab00a8abea55c4">   35</a></span>&#160;(</div>
+<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; name,</div>
+<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1pointFlag.html">pFlagTypeDevice</a>&amp; activePoints,</div>
+<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; y, </div>
+<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; dy,</div>
+<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">deviceViewType1D&lt;realx3&gt;</a>&amp; dy1</div>
+<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;)</div>
+<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;{</div>
+<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160; </div>
+<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;        name,</div>
+<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;        <a class="code" href="namespacepFlow.html#a6ea32be3339f3023ab349c9c3775c916">deviceRPolicyStatic</a> (activePoints.<a class="code" href="classpFlow_1_1pointFlag.html#a766f5bcd312f3e0ca10011181b05f318">activeRange</a>().start(), activePoints.<a class="code" href="classpFlow_1_1pointFlag.html#a766f5bcd312f3e0ca10011181b05f318">activeRange</a>().end()),</div>
+<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">uint32</a> i){</div>
+<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;            <span class="keywordflow">if</span>( activePoints(i))</div>
+<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;            {</div>
+<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;                y[i] +=  dt*(<span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(1.5) * dy[i] - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(0.5) * dy1[i]);</div>
+<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;                dy1[i] = dy[i];</div>
+<div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;            }</div>
+<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;        });</div>
+<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;    Kokkos::fence();</div>
+<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160; </div>
+<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160; </div>
+<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
+<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160;}</div>
+<div class="line"><a name="l00060"></a><span class="lineno">   60</span>&#160; </div>
+<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;}</div>
+<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160; </div>
+<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;<span class="preprocessor">#endif</span></div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="atypes_8hpp_html"><div class="ttname"><a href="types_8hpp.html">types.hpp</a></div></div>
+<div class="ttc" id="astructpFlow_1_1Range_html_a38ebf09d6bfa7f04d4a95ff7f0d3aef4"><div class="ttname"><a href="structpFlow_1_1Range.html#a38ebf09d6bfa7f04d4a95ff7f0d3aef4">pFlow::Range::end</a></div><div class="ttdeci">INLINE_FUNCTION_HD T &amp; end()</div><div class="ttdoc">End.</div><div class="ttdef"><b>Definition:</b> <a href="Range_8hpp_source.html#l00101">Range.hpp:101</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_abd01e8e67e3d94cab04ecaaf4f85ac1b"><div class="ttname"><a href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">pFlow::uint32</a></div><div class="ttdeci">unsigned int uint32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00056">builtinTypes.hpp:56</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="astructpFlow_1_1Range_html_a8ade4cd349991c4c7ed9131410ddd8f0"><div class="ttname"><a href="structpFlow_1_1Range.html#a8ade4cd349991c4c7ed9131410ddd8f0">pFlow::Range::start</a></div><div class="ttdeci">INLINE_FUNCTION_HD T &amp; start()</div><div class="ttdoc">Start.</div><div class="ttdef"><b>Definition:</b> <a href="Range_8hpp_source.html#l00094">Range.hpp:94</a></div></div>
+<div class="ttc" id="aKokkosTypes_8hpp_html"><div class="ttname"><a href="KokkosTypes_8hpp.html">KokkosTypes.hpp</a></div></div>
+<div class="ttc" id="anamespacepFlow_1_1AB2Kernels_html"><div class="ttname"><a href="namespacepFlow_1_1AB2Kernels.html">pFlow::AB2Kernels</a></div><div class="ttdef"><b>Definition:</b> <a href="AB2Kernels_8hpp_source.html#l00009">AB2Kernels.hpp:9</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aa5276597d4016d6696f1f265a13d2164"><div class="ttname"><a href="namespacepFlow.html#aa5276597d4016d6696f1f265a13d2164">pFlow::deviceViewType1D</a></div><div class="ttdeci">Kokkos::View&lt; T * &gt; deviceViewType1D</div><div class="ttdoc">1D array (vector) with default device (memory space and execution space)</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00121">KokkosTypes.hpp:121</a></div></div>
+<div class="ttc" id="anamespacepFlow_1_1AB2Kernels_html_a1d3752d19417e5f211093381ef34cbc9"><div class="ttname"><a href="namespacepFlow_1_1AB2Kernels.html#a1d3752d19417e5f211093381ef34cbc9">pFlow::AB2Kernels::intAllActive</a></div><div class="ttdeci">bool intAllActive(const word &amp;name, real dt, rangeU32 activeRng, const deviceViewType1D&lt; realx3 &gt; &amp;y, const deviceViewType1D&lt; realx3 &gt; &amp;dy, const deviceViewType1D&lt; realx3 &gt; &amp;dy1)</div><div class="ttdef"><b>Definition:</b> <a href="AB2Kernels_8hpp_source.html#l00012">AB2Kernels.hpp:12</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointFlag_html_a766f5bcd312f3e0ca10011181b05f318"><div class="ttname"><a href="classpFlow_1_1pointFlag.html#a766f5bcd312f3e0ca10011181b05f318">pFlow::pointFlag::activeRange</a></div><div class="ttdeci">const INLINE_FUNCTION_HD auto &amp; activeRange() const</div><div class="ttdef"><b>Definition:</b> <a href="pointFlag_8hpp_source.html#l00179">pointFlag.hpp:179</a></div></div>
+<div class="ttc" id="astructpFlow_1_1Range_html"><div class="ttname"><a href="structpFlow_1_1Range.html">pFlow::Range&lt; uint32 &gt;</a></div></div>
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+<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00058">pFlowMacros.hpp:58</a></div></div>
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+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">      O        C enter of</span></div>
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+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">  Copyright (C): www.cemf.ir</span></div>
+<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">  email: hamid.r.norouzi AT gmail.com</span></div>
+<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment">------------------------------------------------------------------------------  </span></div>
+<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment">Licence:</span></div>
+<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">  This file is part of phasicFlow code. It is a free software for simulating </span></div>
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+<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="Time_8hpp.html">Time.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="vocabs_8hpp.html">vocabs.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160; </div>
+<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;<span class="keyword">namespace </span><a class="code" href="namespacepFlow.html">pFlow</a></div>
+<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;{</div>
+<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160; </div>
+<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;<span class="keyword">using</span> <a class="code" href="namespacepFlow.html#a42ff9b272180d6b5b128aafacd50a411">rpIntegration</a> = Kokkos::RangePolicy&lt;</div>
+<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;        <a class="code" href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">DefaultExecutionSpace</a>,</div>
+<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;        Kokkos::Schedule&lt;Kokkos::Static&gt;,</div>
+<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;        Kokkos::IndexType&lt;uint32&gt;</div>
+<div class="line"><a name="l00034"></a><span class="lineno"><a class="line" href="namespacepFlow.html#a42ff9b272180d6b5b128aafacd50a411">   34</a></span>&#160;        &gt;;</div>
+<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160; </div>
+<div class="line"><a name="l00036"></a><span class="lineno"><a class="line" href="namespacepFlow.html#ad07d1cb3572f2d482cdf0e9f2868071b">   36</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="namespacepFlow.html#ad07d1cb3572f2d482cdf0e9f2868071b">intAllActive</a>(</div>
+<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;    <a class="code" href="classpFlow_1_1Field.html">realx3Field_D</a>&amp; y, </div>
+<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;    <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; dy,</div>
+<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;    <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; dy1)</div>
+<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;{</div>
+<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160; </div>
+<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1internalField.html#a65a1eeccd800386379e7db5dd61ea9aa">deviceView</a>();</div>
+<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a1fabd2a58aae204d5639f041216f54da">deviceView</a>();</div>
+<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;    <span class="keyword">auto</span> d_dy1= dy1.<a class="code" href="classpFlow_1_1internalField.html#a65a1eeccd800386379e7db5dd61ea9aa">deviceView</a>();</div>
+<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;    <span class="keyword">auto</span> activeRng = dy1.<a class="code" href="classpFlow_1_1pointField.html#afef304b4d4497e45857f6edef9b049e6">activeRange</a>();</div>
+<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160; </div>
+<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;        <span class="stringliteral">&quot;AdamsBashforth2::correct&quot;</span>,</div>
+<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;        <a class="code" href="namespacepFlow.html#a42ff9b272180d6b5b128aafacd50a411">rpIntegration</a> (activeRng.start(), activeRng.end()),</div>
+<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">uint32</a> i){</div>
+<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;            d_y[i] +=  dt*(<span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(1.5) * d_dy[i] - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(0.5) * d_dy1[i]);</div>
+<div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;            d_dy1[i] = d_dy[i];</div>
+<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;        });</div>
+<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;    Kokkos::fence();</div>
+<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160; </div>
+<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;    </div>
+<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;}</div>
+<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160; </div>
+<div class="line"><a name="l00060"></a><span class="lineno">   60</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="namespacepFlow.html#a19c4c4ae40e7e332c50f85bcf8fb93d9">intScattered</a></div>
+<div class="line"><a name="l00061"></a><span class="lineno"><a class="line" href="namespacepFlow.html#a19c4c4ae40e7e332c50f85bcf8fb93d9">   61</a></span>&#160;(</div>
+<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;    <a class="code" href="classpFlow_1_1Field.html">realx3Field_D</a>&amp; y,</div>
+<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;    <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; dy,</div>
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+<div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160;)</div>
+<div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;{</div>
+<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160; </div>
+<div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;    <span class="keyword">auto</span> d_dy       = dy.<a class="code" href="classpFlow_1_1internalField.html#a65a1eeccd800386379e7db5dd61ea9aa">deviceView</a>();</div>
+<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;    <span class="keyword">auto</span> d_y        = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a1fabd2a58aae204d5639f041216f54da">deviceView</a>();</div>
+<div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160;    <span class="keyword">auto</span> d_dy1      = dy1.<a class="code" href="classpFlow_1_1internalField.html#a65a1eeccd800386379e7db5dd61ea9aa">deviceView</a>();</div>
+<div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160;    <span class="keyword">auto</span> activeRng  = dy1.<a class="code" href="classpFlow_1_1pointField.html#afef304b4d4497e45857f6edef9b049e6">activeRange</a>();</div>
+<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;    <span class="keyword">const</span> <span class="keyword">auto</span>&amp; activeP = dy1.<a class="code" href="classpFlow_1_1internalField.html#a67d82cfcfc613c9ffbccd1f9a9aa0ce6">activePointsMaskDevice</a>();</div>
+<div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160; </div>
+<div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;        <span class="stringliteral">&quot;AdamsBashforth2::correct&quot;</span>,</div>
+<div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;        <a class="code" href="namespacepFlow.html#a42ff9b272180d6b5b128aafacd50a411">rpIntegration</a> (activeRng.start(), activeRng.end()),</div>
+<div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">uint32</a> i){</div>
+<div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;            <span class="keywordflow">if</span>( activeP(i))</div>
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+<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;                d_dy1[i] = d_dy[i];</div>
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+<div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160; </div>
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+<div class="line"><a name="l00094"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a1e7473dc6951c5718277fadf484d4c7d">   94</a></span>&#160;(</div>
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+<div class="line"><a name="l00142"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a31ed4ecb323de5dc3f004927060fdc45">  142</a></span>&#160;(</div>
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+<div class="line"><a name="l00187"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#ad114a4a04b76ea8e10d4388756912a7e">  187</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#ad114a4a04b76ea8e10d4388756912a7e">pFlow::AdamsBashforth2::setInitialVals</a>(</div>
+<div class="line"><a name="l00188"></a><span class="lineno">  188</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
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+<div class="line"><a name="l00193"></a><span class="lineno">  193</span>&#160; </div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a5595208ecd7c3d8fdc960c8d2fd9bb69"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a5595208ecd7c3d8fdc960c8d2fd9bb69">pFlow::AdamsBashforth2::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3PointField_D &amp;UNUSED(y), realx3PointField_D &amp;UNUSED(dy)) final</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00123">AdamsBashforth2.cpp:123</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_abd01e8e67e3d94cab04ecaaf4f85ac1b"><div class="ttname"><a href="namespacepFlow.html#abd01e8e67e3d94cab04ecaaf4f85ac1b">pFlow::uint32</a></div><div class="ttdeci">unsigned int uint32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00056">builtinTypes.hpp:56</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a1e7473dc6951c5718277fadf484d4c7d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a1e7473dc6951c5718277fadf484d4c7d">pFlow::AdamsBashforth2::AdamsBashforth2</a></div><div class="ttdeci">AdamsBashforth2(const word &amp;baseName, pointStructure &amp;pStruct, const word &amp;method, const realx3Field_D &amp;initialValField)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00094">AdamsBashforth2.cpp:94</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1internalField_html_a67d82cfcfc613c9ffbccd1f9a9aa0ce6"><div class="ttname"><a href="classpFlow_1_1internalField.html#a67d82cfcfc613c9ffbccd1f9a9aa0ce6">pFlow::internalField::activePointsMaskDevice</a></div><div class="ttdeci">const pFlagTypeDevice &amp; activePointsMaskDevice() const</div><div class="ttdef"><b>Definition:</b> <a href="internalField_8hpp_source.html#l00120">internalField.hpp:120</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_af547b8e736ebac3297672aff612d426a"><div class="ttname"><a href="namespacepFlow.html#af547b8e736ebac3297672aff612d426a">pFlow::realx3PointField_D</a></div><div class="ttdeci">pointField_D&lt; realx3 &gt; realx3PointField_D</div><div class="ttdef"><b>Definition:</b> <a href="pointFields_8hpp_source.html#l00052">pointFields.hpp:52</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00137">types.hpp:137</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdoc">Default execution space, it can be device exe.</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00061">KokkosTypes.hpp:61</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_ad07d1cb3572f2d482cdf0e9f2868071b"><div class="ttname"><a href="namespacepFlow.html#ad07d1cb3572f2d482cdf0e9f2868071b">pFlow::intAllActive</a></div><div class="ttdeci">bool intAllActive(real dt, realx3Field_D &amp;y, realx3PointField_D &amp;dy, realx3PointField_D &amp;dy1)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00036">AdamsBashforth2.cpp:36</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1Field_html"><div class="ttname"><a href="classpFlow_1_1Field.html">pFlow::Field&lt; realx3 &gt;</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a31ed4ecb323de5dc3f004927060fdc45"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a31ed4ecb323de5dc3f004927060fdc45">pFlow::AdamsBashforth2::correct</a></div><div class="ttdeci">bool correct(real dt, realx3PointField_D &amp;y, realx3PointField_D &amp;dy) final</div><div class="ttdoc">Correction/main integration step.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00142">AdamsBashforth2.cpp:142</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a19c4c4ae40e7e332c50f85bcf8fb93d9"><div class="ttname"><a href="namespacepFlow.html#a19c4c4ae40e7e332c50f85bcf8fb93d9">pFlow::intScattered</a></div><div class="ttdeci">bool intScattered(real dt, realx3Field_D &amp;y, realx3PointField_D &amp;dy, realx3PointField_D &amp;dy1)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00061">AdamsBashforth2.cpp:61</a></div></div>
+<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demGeometry_8hpp_source.html#l00027">demGeometry.hpp:27</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a1fabd2a58aae204d5639f041216f54da"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a1fabd2a58aae204d5639f041216f54da">pFlow::VectorSingle::deviceView</a></div><div class="ttdeci">INLINE_FUNCTION_H auto deviceView() const</div><div class="ttdoc">Device view range [0, size)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00263">VectorSingle.cpp:263</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdoc">Find the base in a group separated by &quot;.&quot; and return it.</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00185">bTypesFunctions.cpp:185</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a2dfa8f3fb9e8b803ed22d20d63e2f094"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a2dfa8f3fb9e8b803ed22d20d63e2f094">pFlow::AdamsBashforth2::correctPStruct</a></div><div class="ttdeci">bool correctPStruct(real dt, pointStructure &amp;pStruct, realx3PointField_D &amp;vel) final</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00165">AdamsBashforth2.cpp:165</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1internalField_html_a0b7cdb82732a46cf6c7aa342cf9c6c33"><div class="ttname"><a href="classpFlow_1_1internalField.html#a0b7cdb82732a46cf6c7aa342cf9c6c33">pFlow::internalField::field</a></div><div class="ttdeci">const FieldType &amp; field() const</div><div class="ttdef"><b>Definition:</b> <a href="internalField_8hpp_source.html#l00109">internalField.hpp:109</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a42ff9b272180d6b5b128aafacd50a411"><div class="ttname"><a href="namespacepFlow.html#a42ff9b272180d6b5b128aafacd50a411">pFlow::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; uint32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel (alias)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00034">AdamsBashforth2.cpp:34</a></div></div>
+<div class="ttc" id="aTime_8hpp_html"><div class="ttname"><a href="Time_8hpp.html">Time.hpp</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html_afef304b4d4497e45857f6edef9b049e6"><div class="ttname"><a href="classpFlow_1_1pointField.html#afef304b4d4497e45857f6edef9b049e6">pFlow::pointField::activeRange</a></div><div class="ttdeci">range activeRange() const</div><div class="ttdef"><b>Definition:</b> <a href="pointField__old_8hpp_source.html#l00138">pointField_old.hpp:138</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00030">objectFile.hpp:30</a></div></div>
+<div class="ttc" id="aAdamsBashforth2_8hpp_html"><div class="ttname"><a href="AdamsBashforth2_8hpp.html">AdamsBashforth2.hpp</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_ad114a4a04b76ea8e10d4388756912a7e"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#ad114a4a04b76ea8e10d4388756912a7e">pFlow::AdamsBashforth2::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) final</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00187">AdamsBashforth2.cpp:187</a></div></div>
+<div class="ttc" id="asetPointStructure_8hpp_html_a385e32971df44b131e4498181a949a91"><div class="ttname"><a href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a></div><div class="ttdeci">auto &amp; pStruct</div><div class="ttdef"><b>Definition:</b> <a href="setPointStructure_8hpp_source.html#l00024">setPointStructure.hpp:24</a></div></div>
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+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">      O        C enter of</span></div>
+<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">     O O       E ngineering and</span></div>
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+<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">   OOOOOOO     F luid flow       </span></div>
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+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">  Copyright (C): www.cemf.ir</span></div>
+<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">  email: hamid.r.norouzi AT gmail.com</span></div>
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+<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">  This file is part of phasicFlow code. It is a free software for simulating </span></div>
+<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">  granular and multiphase flows. You can redistribute it and/or modify it under</span></div>
+<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">  the terms of GNU General Public License v3 or any other later versions. </span></div>
+<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment"> </span></div>
+<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment">  phasicFlow is distributed to help others in their research in the field of </span></div>
+<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment">  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the</span></div>
+<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment">  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.</span></div>
+<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment"></span> </div>
+<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment">-----------------------------------------------------------------------------*/</span></div>
+<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;<span class="preprocessor">#ifndef __AdamsBashforth2_hpp__</span></div>
+<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="preprocessor">#define __AdamsBashforth2_hpp__</span></div>
+<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160; </div>
+<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160; </div>
+<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="integration_8hpp.html">integration.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="pointFields_8hpp.html">pointFields.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="boundaryIntegrationList_8hpp.html">boundaryIntegrationList.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160; </div>
+<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;<span class="keyword">namespace </span><a class="code" href="namespacepFlow.html">pFlow</a></div>
+<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;{</div>
+<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160; </div>
+<div class="line"><a name="l00037"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html">   37</a></span>&#160;<span class="keyword">class </span><a class="code" href="classpFlow_1_1AdamsBashforth2.html">AdamsBashforth2</a></div>
+<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;:</div>
+<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;    <span class="keyword">public</span> <a class="code" href="classpFlow_1_1integration.html">integration</a>,</div>
+<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;    <span class="keyword">public</span> <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a></div>
+<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;{</div>
+<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;<span class="keyword">private</span>:</div>
+<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160; </div>
+<div class="line"><a name="l00044"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#aac898ef26b84e559b552fb63b187e4a3">   44</a></span>&#160;    <a class="code" href="classpFlow_1_1boundaryIntegrationList.html">boundaryIntegrationList</a> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#aac898ef26b84e559b552fb63b187e4a3">boundaryList_</a>;</div>
+<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160; </div>
+<div class="line"><a name="l00046"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#acfc416287e9f31450d930160b1ccaef3">   46</a></span>&#160;    <span class="keyword">friend</span> <span class="keyword">class </span><a class="code" href="classpFlow_1_1AdamsBashforth2.html#acfc416287e9f31450d930160b1ccaef3">processorAB2BoundaryIntegration</a>;</div>
+<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160; </div>
+<div class="line"><a name="l00048"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#aec90bedeff0a2a031a0d310526a33f3b">   48</a></span>&#160;    <span class="keyword">const</span> <span class="keyword">auto</span>&amp; <a class="code" href="classpFlow_1_1AdamsBashforth2.html#aec90bedeff0a2a031a0d310526a33f3b">dy1</a>()<span class="keyword">const</span></div>
+<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;<span class="keyword">    </span>{</div>
+<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;        <span class="keywordflow">return</span> <span class="keyword">static_cast&lt;</span><span class="keyword">const </span><a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp;<span class="keyword">&gt;</span>(*this);</div>
+<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;    }</div>
+<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160; </div>
+<div class="line"><a name="l00053"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a08830f3ac97ae61ab7971024f5bfc99f">   53</a></span>&#160;    <span class="keyword">auto</span>&amp; <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a08830f3ac97ae61ab7971024f5bfc99f">dy1</a>()</div>
+<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;    {</div>
+<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;        <span class="keywordflow">return</span> <span class="keyword">static_cast&lt;</span><a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp;<span class="keyword">&gt;</span>(*this);</div>
+<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;    }</div>
+<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;    </div>
+<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;<span class="keyword">public</span>:</div>
+<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160; </div>
+<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;    <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a4db1a4db4a3c5af1dc7037acec0e40a9">ClassInfo</a>(<span class="stringliteral">&quot;AdamsBashforth2&quot;</span>);</div>
+<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160; </div>
+<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;    <span class="comment">// - Constructors</span></div>
+<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160; </div>
+<div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a1e7473dc6951c5718277fadf484d4c7d">AdamsBashforth2</a>(</div>
+<div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">baseName</a>,</div>
+<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;            <a class="code" href="classpFlow_1_1pointStructure.html">pointStructure</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pStruct</a>,</div>
+<div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a307a24e988c782099db9fc49291efe1e">method</a>,</div>
+<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Field.html">realx3Field_D</a>&amp; initialValField);</div>
+<div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160; </div>
+<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a0e0f8a5b0250e97e857de7bd6a5e9731">~AdamsBashforth2</a>()final = default;</div>
+<div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160; </div>
+<div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a3f4d930dbe074e5170da8b9a74f3c8b8">add_vCtor</a>(</div>
+<div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;            <a class="code" href="classpFlow_1_1integration.html">integration</a>,</div>
+<div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;            <a class="code" href="classpFlow_1_1AdamsBashforth2.html">AdamsBashforth2</a>,</div>
+<div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;            <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>);</div>
+<div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160; </div>
+<div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160; </div>
+<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;    <span class="comment">// - Methods</span></div>
+<div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160; </div>
+<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;        <span class="keywordtype">void</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#abd77556ae6ba5220c472e06b2ef2da31">updateBoundariesSlaveToMasterIfRequested</a>()override;</div>
+<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160; </div>
+<div class="line"><a name="l00087"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a307a24e988c782099db9fc49291efe1e">   87</a></span>&#160;        <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a307a24e988c782099db9fc49291efe1e">method</a>()<span class="keyword">const override</span></div>
+<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;<span class="keyword">        </span>{</div>
+<div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;            <span class="keywordflow">return</span> <span class="stringliteral">&quot;AdamsBashforth2&quot;</span>;</div>
+<div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;        }</div>
+<div class="line"><a name="l00091"></a><span class="lineno">   91</span>&#160; </div>
+<div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a5595208ecd7c3d8fdc960c8d2fd9bb69">predict</a>(</div>
+<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt), </div>
+<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y), </div>
+<div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;        </div>
+<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a5595208ecd7c3d8fdc960c8d2fd9bb69">predict</a>(</div>
+<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;            <a class="code" href="classpFlow_1_1Field.html">realx3Field_D</a>&amp; y, </div>
+<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; dy) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160; </div>
+<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a31ed4ecb323de5dc3f004927060fdc45">correct</a>(</div>
+<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; y, </div>
+<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; dy) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160; </div>
+<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a2dfa8f3fb9e8b803ed22d20d63e2f094">correctPStruct</a>(</div>
+<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;            <a class="code" href="classpFlow_1_1pointStructure.html">pointStructure</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pStruct</a>, </div>
+<div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;            <a class="code" href="classpFlow_1_1pointField.html">realx3PointField_D</a>&amp; vel) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;            </div>
+<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;        </div>
+<div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;        <span class="comment">/*bool hearChanges</span></div>
+<div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;<span class="comment">        (</span></div>
+<div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;<span class="comment">            real t,</span></div>
+<div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;<span class="comment">            real dt,</span></div>
+<div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;<span class="comment">            uint32 iter,</span></div>
+<div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;<span class="comment">            const message&amp; msg, </span></div>
+<div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160;<span class="comment">            const anyList&amp; varList</span></div>
+<div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;<span class="comment">        ) override;*/</span></div>
+<div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160; </div>
+<div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#ad114a4a04b76ea8e10d4388756912a7e">setInitialVals</a>(</div>
+<div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
+<div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y) <span class="keyword">final</span>;</div>
+<div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160; </div>
+<div class="line"><a name="l00126"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth2.html#a5fd0dfea4bc213a1a941358d72bedde0">  126</a></span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth2.html#a5fd0dfea4bc213a1a941358d72bedde0">needSetInitialVals</a>()const final</div>
+<div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;        {</div>
+<div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;            <span class="keywordflow">return</span> <span class="keyword">false</span>;</div>
+<div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;        }</div>
+<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160; </div>
+<div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;};</div>
+<div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160; </div>
+<div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160; </div>
+<div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;} <span class="comment">// pFlow</span></div>
+<div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160; </div>
+<div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;<span class="preprocessor">#endif //__integration_hpp__</span></div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a0e0f8a5b0250e97e857de7bd6a5e9731"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a0e0f8a5b0250e97e857de7bd6a5e9731">pFlow::AdamsBashforth2::~AdamsBashforth2</a></div><div class="ttdeci">~AdamsBashforth2() final=default</div><div class="ttdoc">Destructor.</div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a307a24e988c782099db9fc49291efe1e"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a307a24e988c782099db9fc49291efe1e">pFlow::AdamsBashforth2::method</a></div><div class="ttdeci">word method() const override</div><div class="ttdoc">return integration method</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00087">AdamsBashforth2.hpp:87</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a5595208ecd7c3d8fdc960c8d2fd9bb69"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a5595208ecd7c3d8fdc960c8d2fd9bb69">pFlow::AdamsBashforth2::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3PointField_D &amp;UNUSED(y), realx3PointField_D &amp;UNUSED(dy)) final</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00123">AdamsBashforth2.cpp:123</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00115">integration.hpp:115</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a1e7473dc6951c5718277fadf484d4c7d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a1e7473dc6951c5718277fadf484d4c7d">pFlow::AdamsBashforth2::AdamsBashforth2</a></div><div class="ttdeci">AdamsBashforth2(const word &amp;baseName, pointStructure &amp;pStruct, const word &amp;method, const realx3Field_D &amp;initialValField)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8cpp_source.html#l00094">AdamsBashforth2.cpp:94</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="apointFields_8hpp_html"><div class="ttname"><a href="pointFields_8hpp.html">pointFields.hpp</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a4db1a4db4a3c5af1dc7037acec0e40a9"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a4db1a4db4a3c5af1dc7037acec0e40a9">pFlow::AdamsBashforth2::ClassInfo</a></div><div class="ttdeci">ClassInfo(&quot;AdamsBashforth2&quot;)</div><div class="ttdoc">Class info.</div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_a08830f3ac97ae61ab7971024f5bfc99f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#a08830f3ac97ae61ab7971024f5bfc99f">pFlow::AdamsBashforth2::dy1</a></div><div class="ttdeci">auto &amp; dy1()</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00053">AdamsBashforth2.hpp:53</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1Field_html"><div class="ttname"><a href="classpFlow_1_1Field.html">pFlow::Field&lt; realx3 &gt;</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth2_html_aac898ef26b84e559b552fb63b187e4a3"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth2.html#aac898ef26b84e559b552fb63b187e4a3">pFlow::AdamsBashforth2::boundaryList_</a></div><div class="ttdeci">boundaryIntegrationList boundaryList_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth2_8hpp_source.html#l00044">AdamsBashforth2.hpp:44</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1Vector_html"><div class="ttname"><a href="classpFlow_1_1Vector.html">pFlow::Vector&lt; realx3 &gt;</a></div></div>
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+<div class="title">AdamsBashforth3.cpp</div>  </div>
+</div><!--header-->
+<div class="contents">
+<a href="AdamsBashforth3_8cpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">/*------------------------------- phasicFlow ---------------------------------</span></div>
+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">      O        C enter of</span></div>
+<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">     O O       E ngineering and</span></div>
+<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">    O   O      M ultiscale modeling of</span></div>
+<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">   OOOOOOO     F luid flow       </span></div>
+<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">------------------------------------------------------------------------------</span></div>
+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">  Copyright (C): www.cemf.ir</span></div>
+<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">  email: hamid.r.norouzi AT gmail.com</span></div>
+<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment">------------------------------------------------------------------------------  </span></div>
+<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment">Licence:</span></div>
+<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">  This file is part of phasicFlow code. It is a free software for simulating </span></div>
+<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">  granular and multiphase flows. You can redistribute it and/or modify it under</span></div>
+<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">  the terms of GNU General Public License v3 or any other later versions. </span></div>
+<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment"> </span></div>
+<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment">  phasicFlow is distributed to help others in their research in the field of </span></div>
+<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment">  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the</span></div>
+<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment">  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.</span></div>
+<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment"></span> </div>
+<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment">-----------------------------------------------------------------------------*/</span></div>
+<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160; </div>
+<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="AdamsBashforth3_8hpp.html">AdamsBashforth3.hpp</a>&quot;</span></div>
+<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160; </div>
+<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;<span class="comment">//const real AB3_coef[] = { 23.0 / 12.0, 16.0 / 12.0, 5.0 / 12.0 };</span></div>
+<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160; </div>
+<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<a class="code" href="classpFlow_1_1AdamsBashforth3.html#a1f266356c0127865641500aea4aca002">pFlow::AdamsBashforth3::AdamsBashforth3</a></div>
+<div class="line"><a name="l00026"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a1f266356c0127865641500aea4aca002">   26</a></span>&#160;(</div>
+<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>,</div>
+<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;    <a class="code" href="classpFlow_1_1repository.html">repository</a>&amp; owner,</div>
+<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1pointStructure.html">pointStructure</a>&amp; <a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>,</div>
+<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; method</div>
+<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;)</div>
+<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;:</div>
+<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;    <a class="code" href="classpFlow_1_1integration.html">integration</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>, owner, <a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>, method),</div>
+<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;    history_(</div>
+<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;        owner.emplaceObject&lt;<a class="code" href="classpFlow_1_1pointField.html">pointField&lt;VectorSingle,AB3History&gt;</a>&gt;(</div>
+<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;            <a class="code" href="classpFlow_1_1objectFile.html">objectFile</a>(</div>
+<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;                <a class="code" href="namespacepFlow.html#a12b4d93aa9730629403d73e84386bff5">groupNames</a>(<a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>,<span class="stringliteral">&quot;AB3History&quot;</span>),</div>
+<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;                <span class="stringliteral">&quot;&quot;</span>,</div>
+<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;                objectFile::READ_IF_PRESENT,</div>
+<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;                objectFile::WRITE_ALWAYS),</div>
+<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;            <a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>,</div>
+<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;            <a class="code" href="structpFlow_1_1AB3History.html">AB3History</a>({<a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>,<a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>})))</div>
+<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160; </div>
+<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;{</div>
+<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;    </div>
+<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;}</div>
+<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160; </div>
+<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth3::predict</a></div>
+<div class="line"><a name="l00049"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc">   49</a></span>&#160;(</div>
+<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt),</div>
+<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y),</div>
+<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)</div>
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+<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;{</div>
+<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160; </div>
+<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
+<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;}</div>
+<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160; </div>
+<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div>
+<div class="line"><a name="l00060"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">   60</a></span>&#160;(</div>
+<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt,</div>
+<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y,</div>
+<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy</div>
+<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;)</div>
+<div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;{</div>
+<div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160;    </div>
+<div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;    <span class="keywordflow">if</span>(this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().allActive())</div>
+<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;    {</div>
+<div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;        <span class="keywordflow">return</span> intAll(dt, y, dy, this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().activeRange());</div>
+<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;    }</div>
+<div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160;    <span class="keywordflow">else</span></div>
+<div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160;    {</div>
+<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;        <span class="keywordflow">return</span> intRange(dt, y, dy, this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().activePointsMaskD());</div>
+<div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160;    }</div>
+<div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160; </div>
+<div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
+<div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;}</div>
+<div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160; </div>
+<div class="line"><a name="l00079"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">   79</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth3::setInitialVals</a>(</div>
+<div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
+<div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y)</div>
+<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;{</div>
+<div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
+<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;}</div>
+<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160; </div>
+<div class="line"><a name="l00086"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">   86</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth3::intAll</a>(</div>
+<div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
+<div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
+<div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;    range activeRng)</div>
+<div class="line"><a name="l00091"></a><span class="lineno">   91</span>&#160;{</div>
+<div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;    <span class="keyword">auto</span> d_history = history_.deviceViewAll();</div>
+<div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160; </div>
+<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;        <span class="stringliteral">&quot;AdamsBashforth3::correct&quot;</span>,</div>
+<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth3.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> (activeRng.first, activeRng.second),</div>
+<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">int32</a> i){</div>
+<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;            <span class="keyword">auto</span> ldy = d_dy[i];</div>
+<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;            d_y[i] += dt*( <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(23.0 / 12.0) * ldy </div>
+<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;                - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(16.0 / 12.0) * d_history[i].dy1_ </div>
+<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;                + <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(5.0 / 12.0) * d_history[i].dy2_);</div>
+<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;            d_history[i] = {ldy ,d_history[i].dy1_};</div>
+<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;        });</div>
+<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;    Kokkos::fence();</div>
+<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160; </div>
+<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;    </div>
+<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;}</div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth3::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00079">AdamsBashforth3.cpp:79</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsBashforth3::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00087">AdamsBashforth3.hpp:87</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="astructpFlow_1_1AB3History_html"><div class="ttname"><a href="structpFlow_1_1AB3History.html">pFlow::AB3History</a></div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00031">AdamsBashforth3.hpp:31</a></div></div>
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+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
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+<title>PhasicFlow: src/Integration/AdamsBashforth3/AdamsBashforth3.hpp Source File</title>
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+<div class="title">AdamsBashforth3.hpp</div>  </div>
+</div><!--header-->
+<div class="contents">
+<a href="AdamsBashforth3_8hpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">/*------------------------------- phasicFlow ---------------------------------</span></div>
+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">      O        C enter of</span></div>
+<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">     O O       E ngineering and</span></div>
+<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">    O   O      M ultiscale modeling of</span></div>
+<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">   OOOOOOO     F luid flow       </span></div>
+<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">------------------------------------------------------------------------------</span></div>
+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">  Copyright (C): www.cemf.ir</span></div>
+<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">  email: hamid.r.norouzi AT gmail.com</span></div>
+<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment">------------------------------------------------------------------------------  </span></div>
+<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment">Licence:</span></div>
+<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">  This file is part of phasicFlow code. It is a free software for simulating </span></div>
+<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">  granular and multiphase flows. You can redistribute it and/or modify it under</span></div>
+<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">  the terms of GNU General Public License v3 or any other later versions. </span></div>
+<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment"> </span></div>
+<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment">  phasicFlow is distributed to help others in their research in the field of </span></div>
+<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment">  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the</span></div>
+<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment">  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.</span></div>
+<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment"></span> </div>
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+<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="preprocessor">#ifndef __AdamsBashforth3_hpp__</span></div>
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+<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;    <span class="comment">// - Constructors</span></div>
+<div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;        </div>
+<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a1f266356c0127865641500aea4aca002">AdamsBashforth3</a>(</div>
+<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">baseName</a>,</div>
+<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;            <a class="code" href="classpFlow_1_1repository.html">repository</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">owner</a>,</div>
+<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1pointStructure.html">pointStructure</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pStruct</a>,</div>
+<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a05cf94b87db6b7d4b9c2d2eb81592cf3">method</a>);</div>
+<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;        </div>
+<div class="line"><a name="l00103"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a29f8a3197295f0ffa73d24bbacc6228c">  103</a></span>&#160;        <a class="code" href="classpFlow_1_1uniquePtr.html">uniquePtr&lt;integration&gt;</a> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a29f8a3197295f0ffa73d24bbacc6228c">clone</a>()<span class="keyword">const override</span></div>
+<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;<span class="keyword">        </span>{</div>
+<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;            <span class="keywordflow">return</span> makeUnique&lt;AdamsBashforth3&gt;(*<span class="keyword">this</span>);</div>
+<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;        }</div>
+<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160; </div>
+<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;        <span class="keyword">virtual</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#aaef6f6937fdab620942909e86c18cb3a">~AdamsBashforth3</a>()=<span class="keywordflow">default</span>;</div>
+<div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160; </div>
+<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a9626dd5e2e9be37e395ace9fc484d879">add_vCtor</a>(</div>
+<div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;            <a class="code" href="classpFlow_1_1integration.html">integration</a>,</div>
+<div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;            <a class="code" href="classpFlow_1_1AdamsBashforth3.html">AdamsBashforth3</a>,</div>
+<div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;            <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>);</div>
+<div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160; </div>
+<div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160; </div>
+<div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;    <span class="comment">// - Methods</span></div>
+<div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160; </div>
+<div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc">predict</a>(</div>
+<div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt),</div>
+<div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a> &amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y),</div>
+<div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)) <span class="keyword">override</span>;</div>
+<div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160; </div>
+<div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">correct</a>(<a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a> &amp; y,</div>
+<div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy) <span class="keyword">override</span>;</div>
+<div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160; </div>
+<div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">setInitialVals</a>(</div>
+<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
+<div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y) <span class="keyword">override</span>;</div>
+<div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160; </div>
+<div class="line"><a name="l00133"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#aceb0c803bb6e5c46a1695c4e5b6e641f">  133</a></span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#aceb0c803bb6e5c46a1695c4e5b6e641f">needSetInitialVals</a>()<span class="keyword">const override</span></div>
+<div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;<span class="keyword">        </span>{</div>
+<div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;            <span class="keywordflow">return</span> <span class="keyword">false</span>;</div>
+<div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;        }</div>
+<div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160; </div>
+<div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">intAll</a>(</div>
+<div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
+<div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
+<div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;            range activeRng);</div>
+<div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160; </div>
+<div class="line"><a name="l00146"></a><span class="lineno">  146</span>&#160;        <span class="keyword">template</span>&lt;<span class="keyword">typename</span> activeFunctor&gt;</div>
+<div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a191dc9197b587f09bb5ee7989b0ba43e">intRange</a>(</div>
+<div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt,</div>
+<div class="line"><a name="l00149"></a><span class="lineno">  149</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y,</div>
+<div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy,</div>
+<div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;            activeFunctor activeP );</div>
+<div class="line"><a name="l00152"></a><span class="lineno">  152</span>&#160; </div>
+<div class="line"><a name="l00153"></a><span class="lineno">  153</span>&#160;};</div>
+<div class="line"><a name="l00154"></a><span class="lineno">  154</span>&#160; </div>
+<div class="line"><a name="l00155"></a><span class="lineno">  155</span>&#160; </div>
+<div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> activeFunctor&gt;</div>
+<div class="line"><a name="l00157"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth3.html#a191dc9197b587f09bb5ee7989b0ba43e">  157</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth3.html#a191dc9197b587f09bb5ee7989b0ba43e">pFlow::AdamsBashforth3::intRange</a>(</div>
+<div class="line"><a name="l00158"></a><span class="lineno">  158</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00159"></a><span class="lineno">  159</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y,</div>
+<div class="line"><a name="l00160"></a><span class="lineno">  160</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy,</div>
+<div class="line"><a name="l00161"></a><span class="lineno">  161</span>&#160;    activeFunctor activeP )</div>
+<div class="line"><a name="l00162"></a><span class="lineno">  162</span>&#160;{</div>
+<div class="line"><a name="l00163"></a><span class="lineno">  163</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00164"></a><span class="lineno">  164</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00165"></a><span class="lineno">  165</span>&#160;    <span class="keyword">auto</span> d_history = history_.<a class="code" href="classpFlow_1_1internalField.html#ae49b1b421c0a7de757a2fdc46f163498">deviceViewAll</a>();</div>
+<div class="line"><a name="l00166"></a><span class="lineno">  166</span>&#160;    <span class="keyword">auto</span> activeRng = activeP.activeRange();</div>
+<div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160; </div>
+<div class="line"><a name="l00168"></a><span class="lineno">  168</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;        <span class="stringliteral">&quot;AdamsBashforth3::correct&quot;</span>,</div>
+<div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth3.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> (activeRng.first, activeRng.second),</div>
+<div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">int32</a> i){</div>
+<div class="line"><a name="l00172"></a><span class="lineno">  172</span>&#160;            <span class="keywordflow">if</span>( activeP(i))</div>
+<div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;            {</div>
+<div class="line"><a name="l00174"></a><span class="lineno">  174</span>&#160;                <span class="keyword">auto</span> ldy = d_dy[i];</div>
+<div class="line"><a name="l00175"></a><span class="lineno">  175</span>&#160;                d_y[i] += dt*( <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(23.0 / 12.0) * ldy </div>
+<div class="line"><a name="l00176"></a><span class="lineno">  176</span>&#160;                        - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(16.0 / 12.0) * d_history[i].dy1_ </div>
+<div class="line"><a name="l00177"></a><span class="lineno">  177</span>&#160;                        + <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(5.0 / 12.0) * d_history[i].dy2_);</div>
+<div class="line"><a name="l00178"></a><span class="lineno">  178</span>&#160;                d_history[i] = {ldy ,d_history[i].dy1_};</div>
+<div class="line"><a name="l00179"></a><span class="lineno">  179</span>&#160;            }</div>
+<div class="line"><a name="l00180"></a><span class="lineno">  180</span>&#160;        });</div>
+<div class="line"><a name="l00181"></a><span class="lineno">  181</span>&#160;    Kokkos::fence();</div>
+<div class="line"><a name="l00182"></a><span class="lineno">  182</span>&#160; </div>
+<div class="line"><a name="l00183"></a><span class="lineno">  183</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
+<div class="line"><a name="l00184"></a><span class="lineno">  184</span>&#160;}</div>
+<div class="line"><a name="l00185"></a><span class="lineno">  185</span>&#160; </div>
+<div class="line"><a name="l00186"></a><span class="lineno">  186</span>&#160;} <span class="comment">// pFlow</span></div>
+<div class="line"><a name="l00187"></a><span class="lineno">  187</span>&#160; </div>
+<div class="line"><a name="l00188"></a><span class="lineno">  188</span>&#160;<span class="preprocessor">#endif //__integration_hpp__</span></div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="aclasspFlow_1_1iIstream_html_aecfc9cc0a499c7d44de6a7562bcfea3f"><div class="ttname"><a href="classpFlow_1_1iIstream.html#aecfc9cc0a499c7d44de6a7562bcfea3f">pFlow::iIstream::readBegin</a></div><div class="ttdeci">bool readBegin(const char *funcName)</div><div class="ttdoc">Begin read of data chunk, starts with '('.</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00238">iIstream.cpp:238</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth3::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00079">AdamsBashforth3.cpp:79</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ac46bad4a80ef6f7507d3b795f42b7326"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ac46bad4a80ef6f7507d3b795f42b7326">pFlow::AdamsBashforth3::history_</a></div><div class="ttdeci">pointField&lt; VectorSingle, AB3History &gt; &amp; history_</div><div class="ttdoc">Integration history.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00080">AdamsBashforth3.hpp:80</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_afc491fbd69e70abdcb02a8cd3ce2939e"><div class="ttname"><a href="pFlowMacros_8hpp.html#afc491fbd69e70abdcb02a8cd3ce2939e">INLINE_FUNCTION</a></div><div class="ttdeci">#define INLINE_FUNCTION</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00066">pFlowMacros.hpp:66</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsBashforth3::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00087">AdamsBashforth3.hpp:87</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="astructpFlow_1_1AB3History_html"><div class="ttname"><a href="structpFlow_1_1AB3History.html">pFlow::AB3History</a></div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00031">AdamsBashforth3.hpp:31</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_afb1938bc6cfc199cbd70f224040d4afc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth3::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3Vector_D &amp;UNUSED(y), realx3Vector_D &amp;UNUSED(dy)) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00049">AdamsBashforth3.cpp:49</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_aceb0c803bb6e5c46a1695c4e5b6e641f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#aceb0c803bb6e5c46a1695c4e5b6e641f">pFlow::AdamsBashforth3::needSetInitialVals</a></div><div class="ttdeci">bool needSetInitialVals() const override</div><div class="ttdoc">Check if the method requires any set initial vals.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00133">AdamsBashforth3.hpp:133</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1internalField_html_ae49b1b421c0a7de757a2fdc46f163498"><div class="ttname"><a href="classpFlow_1_1internalField.html#ae49b1b421c0a7de757a2fdc46f163498">pFlow::internalField&lt; T, void &gt;::deviceViewAll</a></div><div class="ttdeci">const auto &amp; deviceViewAll() const</div><div class="ttdef"><b>Definition:</b> <a href="internalField_8hpp_source.html#l00092">internalField.hpp:92</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00115">integration.hpp:115</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html_a8d82c951160ac1444ee2a2d9ae1ecb11"><div class="ttname"><a href="classpFlow_1_1iIstream.html#a8d82c951160ac1444ee2a2d9ae1ecb11">pFlow::iIstream::readEnd</a></div><div class="ttdeci">bool readEnd(const char *funcName)</div><div class="ttdoc">End read of data chunk, ends with ')' return true or FatalIOError.</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00258">iIstream.cpp:258</a></div></div>
+<div class="ttc" id="apointFields_8hpp_html"><div class="ttname"><a href="pointFields_8hpp.html">pointFields.hpp</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_a922d2784284e8f6ee4009c3d92ba48b6"><div class="ttname"><a href="pFlowMacros_8hpp.html#a922d2784284e8f6ee4009c3d92ba48b6">FUNCTION_NAME</a></div><div class="ttdeci">#define FUNCTION_NAME</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00029">pFlowMacros.hpp:29</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_aaef6f6937fdab620942909e86c18cb3a"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#aaef6f6937fdab620942909e86c18cb3a">pFlow::AdamsBashforth3::~AdamsBashforth3</a></div><div class="ttdeci">virtual ~AdamsBashforth3()=default</div><div class="ttdoc">Destructor.</div></div>
+<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdoc">Default execution space, it can be device exe.</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00061">KokkosTypes.hpp:61</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_ac755e4bf02c3732d1eb89de9e903ebdb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#ac755e4bf02c3732d1eb89de9e903ebdb">pFlow::AdamsBashforth3::correct</a></div><div class="ttdeci">bool correct(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00060">AdamsBashforth3.cpp:60</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a1f266356c0127865641500aea4aca002"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a1f266356c0127865641500aea4aca002">pFlow::AdamsBashforth3::AdamsBashforth3</a></div><div class="ttdeci">AdamsBashforth3(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00026">AdamsBashforth3.cpp:26</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">pFlow::token::SPACE</a></div><div class="ttdeci">@ SPACE</div><div class="ttdoc">Nul character.</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00086">token.hpp:86</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00122">integration.hpp:122</a></div></div>
+<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demGeometry_8hpp_source.html#l00027">demGeometry.hpp:27</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1IOstream_html_a367eb3425fc4e8270e2aa961df8ac8a5"><div class="ttname"><a href="classpFlow_1_1IOstream.html#a367eb3425fc4e8270e2aa961df8ac8a5">pFlow::IOstream::check</a></div><div class="ttdeci">virtual bool check(const char *operation) const</div><div class="ttdoc">Check IOstream status for given operation.</div><div class="ttdef"><b>Definition:</b> <a href="IOstream_8cpp_source.html#l00042">IOstream.cpp:42</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a191dc9197b587f09bb5ee7989b0ba43e"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a191dc9197b587f09bb5ee7989b0ba43e">pFlow::AdamsBashforth3::intRange</a></div><div class="ttdeci">bool intRange(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, activeFunctor activeP)</div><div class="ttdoc">Integrate on active points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00157">AdamsBashforth3.hpp:157</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html"><div class="ttname"><a href="classpFlow_1_1iIstream.html">pFlow::iIstream</a></div><div class="ttdoc">Interface class for any input stream</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8hpp_source.html#l00037">iIstream.hpp:37</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a9626dd5e2e9be37e395ace9fc484d879"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a9626dd5e2e9be37e395ace9fc484d879">pFlow::AdamsBashforth3::add_vCtor</a></div><div class="ttdeci">add_vCtor(integration, AdamsBashforth3, word)</div><div class="ttdoc">Add this to the virtual constructor table.</div></div>
+<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00050">builtinTypes.hpp:50</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a85ed561d066dae339196cd058783674f"><div class="ttname"><a href="namespacepFlow.html#a85ed561d066dae339196cd058783674f">pFlow::operator&gt;&gt;</a></div><div class="ttdeci">INLINE_FUNCTION iIstream &amp; operator&gt;&gt;(iIstream &amp;str, AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00041">AdamsBashforth3.hpp:41</a></div></div>
+<div class="ttc" id="astructpFlow_1_1AB3History_html_a63d020867c10f8f3fde329eb526a066b"><div class="ttname"><a href="structpFlow_1_1AB3History.html#a63d020867c10f8f3fde329eb526a066b">pFlow::AB3History::dy2_</a></div><div class="ttdeci">realx3 dy2_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00036">AdamsBashforth3.hpp:36</a></div></div>
+<div class="ttc" id="astructpFlow_1_1AB3History_html_ad542852c8da95d45b6a6014d9f42a663"><div class="ttname"><a href="structpFlow_1_1AB3History.html#ad542852c8da95d45b6a6014d9f42a663">pFlow::AB3History::TypeInfoNV</a></div><div class="ttdeci">TypeInfoNV(&quot;AB3History&quot;)</div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">pFlow::token::END_LIST</a></div><div class="ttdeci">@ END_LIST</div><div class="ttdoc">Begin list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00092">token.hpp:92</a></div></div>
+<div class="ttc" id="astructpFlow_1_1AB3History_html_a419568ee851e74f5356a30fc5ce2eddf"><div class="ttname"><a href="structpFlow_1_1AB3History.html#a419568ee851e74f5356a30fc5ce2eddf">pFlow::AB3History::dy1_</a></div><div class="ttdeci">realx3 dy1_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00035">AdamsBashforth3.hpp:35</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a148d74ad0977268be8ea8b26a147f619"><div class="ttname"><a href="namespacepFlow.html#a148d74ad0977268be8ea8b26a147f619">pFlow::operator&lt;&lt;</a></div><div class="ttdeci">INLINE_FUNCTION iOstream &amp; operator&lt;&lt;(iOstream &amp;str, const AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00057">AdamsBashforth3.hpp:57</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth3::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8cpp_source.html#l00086">AdamsBashforth3.cpp:86</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a10329e18307a60d3fdb203bcbed2b295"><div class="ttname"><a href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">pFlow::integration::owner</a></div><div class="ttdeci">repository &amp; owner()</div><div class="ttdoc">Ref to the owner repository.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00129">integration.hpp:129</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a51122b76468e0c5f19ea69c5c0ca6cf4"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">pFlow::VectorSingle::deviceViewAll</a></div><div class="ttdeci">INLINE_FUNCTION_H auto &amp; deviceViewAll()</div><div class="ttdoc">Device view range [0,capcity)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00249">VectorSingle.cpp:249</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb">pFlow::token::BEGIN_LIST</a></div><div class="ttdeci">@ BEGIN_LIST</div><div class="ttdoc">End entry [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00091">token.hpp:91</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1uniquePtr_html"><div class="ttname"><a href="classpFlow_1_1uniquePtr.html">pFlow::uniquePtr</a></div><div class="ttdef"><b>Definition:</b> <a href="uniquePtr_8hpp_source.html#l00042">uniquePtr.hpp:42</a></div></div>
+<div class="ttc" id="aintegration_8hpp_html"><div class="ttname"><a href="integration_8hpp.html">integration.hpp</a></div></div>
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+<div class="ttc" id="apFlowMacros_8hpp_html_aa7d4742cdf24a3792276e669531d145c"><div class="ttname"><a href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a></div><div class="ttdeci">#define LAMBDA_HD</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00058">pFlowMacros.hpp:58</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth3_html_af73af994d6bfc50ff9bda4606cac960b"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth3.html#af73af994d6bfc50ff9bda4606cac960b">pFlow::AdamsBashforth3::TypeInfo</a></div><div class="ttdeci">TypeInfo(&quot;AdamsBashforth3&quot;)</div></div>
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+<div class="ttc" id="aclasspFlow_1_1integration_html_a05cf94b87db6b7d4b9c2d2eb81592cf3"><div class="ttname"><a href="classpFlow_1_1integration.html#a05cf94b87db6b7d4b9c2d2eb81592cf3">pFlow::integration::method</a></div><div class="ttdeci">virtual word method() const =0</div><div class="ttdoc">return integration method</div></div>
+<div class="ttc" id="aclasspFlow_1_1repository_html"><div class="ttname"><a href="classpFlow_1_1repository.html">pFlow::repository</a></div><div class="ttdef"><b>Definition:</b> <a href="repository_8hpp_source.html#l00034">repository.hpp:34</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1triple_html"><div class="ttname"><a href="classpFlow_1_1triple.html">pFlow::triple&lt; real &gt;</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1Vector_html"><div class="ttname"><a href="classpFlow_1_1Vector.html">pFlow::Vector&lt; realx3 &gt;</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iOstream_html"><div class="ttname"><a href="classpFlow_1_1iOstream.html">pFlow::iOstream</a></div><div class="ttdoc">Interface class for any output stream.</div><div class="ttdef"><b>Definition:</b> <a href="iOstream_8hpp_source.html#l00059">iOstream.hpp:59</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer</a></div><div class="ttdoc">It holds two vectors of indecis on Host and Device.</div><div class="ttdef"><b>Definition:</b> <a href="indexContainer_8hpp_source.html#l00039">indexContainer.hpp:39</a></div></div>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+<a href="AdamsBashforth4_8cpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">/*------------------------------- phasicFlow ---------------------------------</span></div>
+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">      O        C enter of</span></div>
+<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">     O O       E ngineering and</span></div>
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+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">  Copyright (C): www.cemf.ir</span></div>
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+<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">  This file is part of phasicFlow code. It is a free software for simulating </span></div>
+<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">  granular and multiphase flows. You can redistribute it and/or modify it under</span></div>
+<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">  the terms of GNU General Public License v3 or any other later versions. </span></div>
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+<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;    <span class="keyword">auto</span> d_history = history_.deviceViewAll();</div>
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+<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth4.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> (activeRng.first, activeRng.second),</div>
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+<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;                    + <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(37.0 / 24.0) * d_history[i].dy2_</div>
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+<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;                    );</div>
+<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;            d_history[i].dy3_ = d_history[i].dy2_;</div>
+<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;            d_history[i].dy2_ = d_history[i].dy1_;</div>
+<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;            d_history[i].dy1_ = d_dy[i];</div>
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+<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;    Kokkos::fence();</div>
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+<div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;}</div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00137">types.hpp:137</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a16a2137651b2c6b8ea4a8daf1d89ff61"><div class="ttname"><a href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">pFlow::baseName</a></div><div class="ttdeci">word baseName(const word &amp;w, char sep='.')</div><div class="ttdoc">Find the base in a group separated by &quot;.&quot; and return it.</div><div class="ttdef"><b>Definition:</b> <a href="bTypesFunctions_8cpp_source.html#l00185">bTypesFunctions.cpp:185</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsBashforth4::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00091">AdamsBashforth4.hpp:91</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00050">builtinTypes.hpp:50</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_afb1938bc6cfc199cbd70f224040d4afc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth4::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3Vector_D &amp;UNUSED(y), realx3Vector_D &amp;UNUSED(dy)) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00049">AdamsBashforth4.cpp:49</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1objectFile_html"><div class="ttname"><a href="classpFlow_1_1objectFile.html">pFlow::objectFile</a></div><div class="ttdef"><b>Definition:</b> <a href="objectFile_8hpp_source.html#l00030">objectFile.hpp:30</a></div></div>
+<div class="ttc" id="asetPointStructure_8hpp_html_a385e32971df44b131e4498181a949a91"><div class="ttname"><a href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a></div><div class="ttdeci">auto &amp; pStruct</div><div class="ttdef"><b>Definition:</b> <a href="setPointStructure_8hpp_source.html#l00024">setPointStructure.hpp:24</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a51122b76468e0c5f19ea69c5c0ca6cf4"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">pFlow::VectorSingle::deviceViewAll</a></div><div class="ttdeci">INLINE_FUNCTION_H auto &amp; deviceViewAll()</div><div class="ttdoc">Device view range [0,capcity)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00249">VectorSingle.cpp:249</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a69029aec4bfcd45b781d1cfc65359fcb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a69029aec4bfcd45b781d1cfc65359fcb">pFlow::AdamsBashforth4::AdamsBashforth4</a></div><div class="ttdeci">AdamsBashforth4(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00026">AdamsBashforth4.cpp:26</a></div></div>
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+<div class="ttc" id="aAdamsBashforth4_8hpp_html"><div class="ttname"><a href="AdamsBashforth4_8hpp.html">AdamsBashforth4.hpp</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1repository_html"><div class="ttname"><a href="classpFlow_1_1repository.html">pFlow::repository</a></div><div class="ttdef"><b>Definition:</b> <a href="repository_8hpp_source.html#l00034">repository.hpp:34</a></div></div>
+<div class="ttc" id="astructpFlow_1_1AB4History_html"><div class="ttname"><a href="structpFlow_1_1AB4History.html">pFlow::AB4History</a></div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00031">AdamsBashforth4.hpp:31</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a152b752a6b7b37e70fa5e7c99a484783"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a152b752a6b7b37e70fa5e7c99a484783">pFlow::AdamsBashforth4::intAll</a></div><div class="ttdeci">bool intAll(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, range activeRng)</div><div class="ttdoc">Integrate on all points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00086">AdamsBashforth4.cpp:86</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1Vector_html"><div class="ttname"><a href="classpFlow_1_1Vector.html">pFlow::Vector&lt; realx3 &gt;</a></div></div>
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+<div class="ttc" id="aclasspFlow_1_1indexContainer_html"><div class="ttname"><a href="classpFlow_1_1indexContainer.html">pFlow::indexContainer</a></div><div class="ttdoc">It holds two vectors of indecis on Host and Device.</div><div class="ttdef"><b>Definition:</b> <a href="indexContainer_8hpp_source.html#l00039">indexContainer.hpp:39</a></div></div>
+<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
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+<a href="AdamsBashforth4_8hpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">/*------------------------------- phasicFlow ---------------------------------</span></div>
+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">      O        C enter of</span></div>
+<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">     O O       E ngineering and</span></div>
+<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">    O   O      M ultiscale modeling of</span></div>
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+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">  Copyright (C): www.cemf.ir</span></div>
+<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">  email: hamid.r.norouzi AT gmail.com</span></div>
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+<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;    str &gt;&gt; ab4.<a class="code" href="structpFlow_1_1AB4History.html#a63473eb8257f38bf8863a5c7bd03a330">dy3_</a>;</div>
+<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;    </div>
+<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;    str.<a class="code" href="classpFlow_1_1iIstream.html#a8d82c951160ac1444ee2a2d9ae1ecb11">readEnd</a>(<span class="stringliteral">&quot;AB4History&quot;</span>);</div>
+<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160; </div>
+<div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;    str.<a class="code" href="classpFlow_1_1IOstream.html#a367eb3425fc4e8270e2aa961df8ac8a5">check</a>(<a class="code" href="pFlowMacros_8hpp.html#a922d2784284e8f6ee4009c3d92ba48b6">FUNCTION_NAME</a>);</div>
+<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160; </div>
+<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;    <span class="keywordflow">return</span> str;</div>
+<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;    </div>
+<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;}</div>
+<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160; </div>
+<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160;<a class="code" href="pFlowMacros_8hpp.html#afc491fbd69e70abdcb02a8cd3ce2939e">INLINE_FUNCTION</a></div>
+<div class="line"><a name="l00060"></a><span class="lineno"><a class="line" href="namespacepFlow.html#aa85d76c90b7f76203f3d8ff43c85855d">   60</a></span>&#160;<a class="code" href="classpFlow_1_1iOstream.html">iOstream</a>&amp; <a class="code" href="namespacepFlow.html#a148d74ad0977268be8ea8b26a147f619">operator&lt;&lt;</a>(<a class="code" href="classpFlow_1_1iOstream.html">iOstream</a>&amp; str, <span class="keyword">const</span> <a class="code" href="structpFlow_1_1AB4History.html">AB4History</a>&amp; ab4)</div>
+<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;{</div>
+<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160;    str &lt;&lt; <a class="code" href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31a8042f41e6dc49acd5cf4e86844f79acb">token::BEGIN_LIST</a> &lt;&lt; ab4.<a class="code" href="structpFlow_1_1AB4History.html#a419568ee851e74f5356a30fc5ce2eddf">dy1_</a></div>
+<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;        &lt;&lt; <a class="code" href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">token::SPACE</a> &lt;&lt; ab4.<a class="code" href="structpFlow_1_1AB4History.html#a63d020867c10f8f3fde329eb526a066b">dy2_</a></div>
+<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;        &lt;&lt; <a class="code" href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">token::SPACE</a> &lt;&lt; ab4.<a class="code" href="structpFlow_1_1AB4History.html#a63473eb8257f38bf8863a5c7bd03a330">dy3_</a></div>
+<div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;        &lt;&lt; <a class="code" href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">token::END_LIST</a>;     </div>
+<div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160; </div>
+<div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;    str.<a class="code" href="classpFlow_1_1IOstream.html#a367eb3425fc4e8270e2aa961df8ac8a5">check</a>(<a class="code" href="pFlowMacros_8hpp.html#a922d2784284e8f6ee4009c3d92ba48b6">FUNCTION_NAME</a>);</div>
+<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160; </div>
+<div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;    <span class="keywordflow">return</span> str;</div>
+<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;}</div>
+<div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160; </div>
+<div class="line"><a name="l00077"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth4.html">   77</a></span>&#160;<span class="keyword">class </span><a class="code" href="classpFlow_1_1AdamsBashforth4.html">AdamsBashforth4</a></div>
+<div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;:</div>
+<div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;    <span class="keyword">public</span> <a class="code" href="classpFlow_1_1integration.html">integration</a></div>
+<div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160;{</div>
+<div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;<span class="keyword">protected</span>:</div>
+<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160; </div>
+<div class="line"><a name="l00084"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth4.html#afc6b0e49b18c62aa5edca2a8212c1292">   84</a></span>&#160;    <a class="code" href="classpFlow_1_1pointField.html">pointField&lt;VectorSingle,AB4History&gt;</a>&amp; <a class="code" href="classpFlow_1_1AdamsBashforth4.html#afc6b0e49b18c62aa5edca2a8212c1292">history_</a>;</div>
+<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160; </div>
+<div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;    <span class="keyword">using</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> = Kokkos::RangePolicy&lt;</div>
+<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;            <a class="code" href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">DefaultExecutionSpace</a>,</div>
+<div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;            Kokkos::Schedule&lt;Kokkos::Static&gt;,</div>
+<div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;            Kokkos::IndexType&lt;int32&gt;</div>
+<div class="line"><a name="l00091"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth4.html#ace46ff4fbe3c001c816dbc4f9f67606f">   91</a></span>&#160;            &gt;;</div>
+<div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160; </div>
+<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;<span class="keyword">public</span>:</div>
+<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160; </div>
+<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;    <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a7962c8cac5d82d0793dfeaba6c162f4d">TypeInfo</a>(<span class="stringliteral">&quot;AdamsBashforth4&quot;</span>);</div>
+<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160; </div>
+<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;    <span class="comment">// - Constructors</span></div>
+<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;        </div>
+<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a69029aec4bfcd45b781d1cfc65359fcb">AdamsBashforth4</a>(</div>
+<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">baseName</a>,</div>
+<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;            <a class="code" href="classpFlow_1_1repository.html">repository</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">owner</a>,</div>
+<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1pointStructure.html">pointStructure</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pStruct</a>,</div>
+<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;            <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="classpFlow_1_1integration.html#a05cf94b87db6b7d4b9c2d2eb81592cf3">method</a>);</div>
+<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;        </div>
+<div class="line"><a name="l00107"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth4.html#a29f8a3197295f0ffa73d24bbacc6228c">  107</a></span>&#160;        <a class="code" href="classpFlow_1_1uniquePtr.html">uniquePtr&lt;integration&gt;</a> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a29f8a3197295f0ffa73d24bbacc6228c">clone</a>()<span class="keyword">const override</span></div>
+<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;<span class="keyword">        </span>{</div>
+<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;            <span class="keywordflow">return</span> makeUnique&lt;AdamsBashforth4&gt;(*<span class="keyword">this</span>);</div>
+<div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;        }</div>
+<div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160; </div>
+<div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;        <span class="keyword">virtual</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a8c3fff8fec7e5ef08cea578fed2e5fae">~AdamsBashforth4</a>()=<span class="keywordflow">default</span>;</div>
+<div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160; </div>
+<div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a1084909fe2f0dbd8f2af68ab4e94692a">add_vCtor</a>(</div>
+<div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;            <a class="code" href="classpFlow_1_1integration.html">integration</a>,</div>
+<div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;            <a class="code" href="classpFlow_1_1AdamsBashforth4.html">AdamsBashforth4</a>,</div>
+<div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160;            <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>);</div>
+<div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160; </div>
+<div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160; </div>
+<div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;    <span class="comment">// - Methods</span></div>
+<div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;        </div>
+<div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#afb1938bc6cfc199cbd70f224040d4afc">predict</a>(</div>
+<div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt),</div>
+<div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a> &amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y),</div>
+<div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)) <span class="keyword">override</span>;</div>
+<div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160; </div>
+<div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#ac755e4bf02c3732d1eb89de9e903ebdb">correct</a>(</div>
+<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a> &amp; y,</div>
+<div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy) <span class="keyword">override</span>;</div>
+<div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160; </div>
+<div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a8da2088458d635dfa1fbe1823a3bfd6d">setInitialVals</a>(</div>
+<div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
+<div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;            <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y) <span class="keyword">override</span>;</div>
+<div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160; </div>
+<div class="line"><a name="l00138"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth4.html#aceb0c803bb6e5c46a1695c4e5b6e641f">  138</a></span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#aceb0c803bb6e5c46a1695c4e5b6e641f">needSetInitialVals</a>()<span class="keyword">const override</span></div>
+<div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;<span class="keyword">        </span>{</div>
+<div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;            <span class="keywordflow">return</span> <span class="keyword">false</span>;</div>
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+<div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160; </div>
+<div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a152b752a6b7b37e70fa5e7c99a484783">intAll</a>(</div>
+<div class="line"><a name="l00145"></a><span class="lineno">  145</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00146"></a><span class="lineno">  146</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y, </div>
+<div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy, </div>
+<div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;            range activeRng);</div>
+<div class="line"><a name="l00149"></a><span class="lineno">  149</span>&#160; </div>
+<div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;        <span class="keyword">template</span>&lt;<span class="keyword">typename</span> activeFunctor&gt;</div>
+<div class="line"><a name="l00152"></a><span class="lineno">  152</span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a191dc9197b587f09bb5ee7989b0ba43e">intRange</a>(</div>
+<div class="line"><a name="l00153"></a><span class="lineno">  153</span>&#160;            <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt,</div>
+<div class="line"><a name="l00154"></a><span class="lineno">  154</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y,</div>
+<div class="line"><a name="l00155"></a><span class="lineno">  155</span>&#160;            <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy,</div>
+<div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;            activeFunctor activeP );</div>
+<div class="line"><a name="l00157"></a><span class="lineno">  157</span>&#160; </div>
+<div class="line"><a name="l00158"></a><span class="lineno">  158</span>&#160;};</div>
+<div class="line"><a name="l00159"></a><span class="lineno">  159</span>&#160; </div>
+<div class="line"><a name="l00160"></a><span class="lineno">  160</span>&#160; </div>
+<div class="line"><a name="l00161"></a><span class="lineno">  161</span>&#160;<span class="keyword">template</span>&lt;<span class="keyword">typename</span> activeFunctor&gt;</div>
+<div class="line"><a name="l00162"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth4.html#a191dc9197b587f09bb5ee7989b0ba43e">  162</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth4.html#a191dc9197b587f09bb5ee7989b0ba43e">pFlow::AdamsBashforth4::intRange</a>(</div>
+<div class="line"><a name="l00163"></a><span class="lineno">  163</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
+<div class="line"><a name="l00164"></a><span class="lineno">  164</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; y,</div>
+<div class="line"><a name="l00165"></a><span class="lineno">  165</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; dy,</div>
+<div class="line"><a name="l00166"></a><span class="lineno">  166</span>&#160;    activeFunctor activeP )</div>
+<div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;{</div>
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+<div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;    <span class="keyword">auto</span> d_y  = y.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
+<div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;    <span class="keyword">auto</span> d_history = history_.<a class="code" href="classpFlow_1_1internalField.html#ae49b1b421c0a7de757a2fdc46f163498">deviceViewAll</a>();</div>
+<div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;    <span class="keyword">auto</span> activeRng = activeP.activeRange();</div>
+<div class="line"><a name="l00172"></a><span class="lineno">  172</span>&#160; </div>
+<div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00174"></a><span class="lineno">  174</span>&#160;        <span class="stringliteral">&quot;AdamsBashforth4::correct&quot;</span>,</div>
+<div class="line"><a name="l00175"></a><span class="lineno">  175</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth4.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> (activeRng.first, activeRng.second),</div>
+<div class="line"><a name="l00176"></a><span class="lineno">  176</span>&#160;        <a class="code" href="pFlowMacros_8hpp.html#aa7d4742cdf24a3792276e669531d145c">LAMBDA_HD</a>(<a class="code" href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">int32</a> i){</div>
+<div class="line"><a name="l00177"></a><span class="lineno">  177</span>&#160;            <span class="keywordflow">if</span>( activeP(i))</div>
+<div class="line"><a name="l00178"></a><span class="lineno">  178</span>&#160;            {</div>
+<div class="line"><a name="l00179"></a><span class="lineno">  179</span>&#160;                </div>
+<div class="line"><a name="l00180"></a><span class="lineno">  180</span>&#160;                d_y[i] += dt*( </div>
+<div class="line"><a name="l00181"></a><span class="lineno">  181</span>&#160;                            <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(55.0 / 24.0) * d_dy[i]</div>
+<div class="line"><a name="l00182"></a><span class="lineno">  182</span>&#160;                        - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(59.0 / 24.0) * d_history[i].dy1_ </div>
+<div class="line"><a name="l00183"></a><span class="lineno">  183</span>&#160;                        + <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(37.0 / 24.0) * d_history[i].dy2_</div>
+<div class="line"><a name="l00184"></a><span class="lineno">  184</span>&#160;                        - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>( 9.0 / 24.0) * d_history[i].dy3_</div>
+<div class="line"><a name="l00185"></a><span class="lineno">  185</span>&#160;                        );</div>
+<div class="line"><a name="l00186"></a><span class="lineno">  186</span>&#160;                d_history[i].dy3_ = d_history[i].dy2_;</div>
+<div class="line"><a name="l00187"></a><span class="lineno">  187</span>&#160;                d_history[i].dy2_ = d_history[i].dy1_;</div>
+<div class="line"><a name="l00188"></a><span class="lineno">  188</span>&#160;                d_history[i].dy1_ = d_dy[i];</div>
+<div class="line"><a name="l00189"></a><span class="lineno">  189</span>&#160;            }</div>
+<div class="line"><a name="l00190"></a><span class="lineno">  190</span>&#160;        });</div>
+<div class="line"><a name="l00191"></a><span class="lineno">  191</span>&#160;    Kokkos::fence();</div>
+<div class="line"><a name="l00192"></a><span class="lineno">  192</span>&#160; </div>
+<div class="line"><a name="l00193"></a><span class="lineno">  193</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
+<div class="line"><a name="l00194"></a><span class="lineno">  194</span>&#160;}</div>
+<div class="line"><a name="l00195"></a><span class="lineno">  195</span>&#160; </div>
+<div class="line"><a name="l00196"></a><span class="lineno">  196</span>&#160;} <span class="comment">// pFlow</span></div>
+<div class="line"><a name="l00197"></a><span class="lineno">  197</span>&#160; </div>
+<div class="line"><a name="l00198"></a><span class="lineno">  198</span>&#160;<span class="preprocessor">#endif //__integration_hpp__</span></div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="astructpFlow_1_1AB4History_html_a63473eb8257f38bf8863a5c7bd03a330"><div class="ttname"><a href="structpFlow_1_1AB4History.html#a63473eb8257f38bf8863a5c7bd03a330">pFlow::AB4History::dy3_</a></div><div class="ttdeci">realx3 dy3_</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00037">AdamsBashforth4.hpp:37</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a191dc9197b587f09bb5ee7989b0ba43e"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a191dc9197b587f09bb5ee7989b0ba43e">pFlow::AdamsBashforth4::intRange</a></div><div class="ttdeci">bool intRange(real dt, realx3Vector_D &amp;y, realx3Vector_D &amp;dy, activeFunctor activeP)</div><div class="ttdoc">Integrate on active points in the active range.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00162">AdamsBashforth4.hpp:162</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html_aecfc9cc0a499c7d44de6a7562bcfea3f"><div class="ttname"><a href="classpFlow_1_1iIstream.html#aecfc9cc0a499c7d44de6a7562bcfea3f">pFlow::iIstream::readBegin</a></div><div class="ttdeci">bool readBegin(const char *funcName)</div><div class="ttdoc">Begin read of data chunk, starts with '('.</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00238">iIstream.cpp:238</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_afc491fbd69e70abdcb02a8cd3ce2939e"><div class="ttname"><a href="pFlowMacros_8hpp.html#afc491fbd69e70abdcb02a8cd3ce2939e">INLINE_FUNCTION</a></div><div class="ttdeci">#define INLINE_FUNCTION</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00066">pFlowMacros.hpp:66</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a29f8a3197295f0ffa73d24bbacc6228c"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a29f8a3197295f0ffa73d24bbacc6228c">pFlow::AdamsBashforth4::clone</a></div><div class="ttdeci">uniquePtr&lt; integration &gt; clone() const override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00107">AdamsBashforth4.hpp:107</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1internalField_html_ae49b1b421c0a7de757a2fdc46f163498"><div class="ttname"><a href="classpFlow_1_1internalField.html#ae49b1b421c0a7de757a2fdc46f163498">pFlow::internalField&lt; T, void &gt;::deviceViewAll</a></div><div class="ttdeci">const auto &amp; deviceViewAll() const</div><div class="ttdef"><b>Definition:</b> <a href="internalField_8hpp_source.html#l00092">internalField.hpp:92</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a5a622149e803f0fa292a95784c12a7b8"><div class="ttname"><a href="classpFlow_1_1integration.html#a5a622149e803f0fa292a95784c12a7b8">pFlow::integration::pStruct</a></div><div class="ttdeci">const auto &amp; pStruct() const</div><div class="ttdoc">Const ref to pointStructure.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00115">integration.hpp:115</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html_a8d82c951160ac1444ee2a2d9ae1ecb11"><div class="ttname"><a href="classpFlow_1_1iIstream.html#a8d82c951160ac1444ee2a2d9ae1ecb11">pFlow::iIstream::readEnd</a></div><div class="ttdeci">bool readEnd(const char *funcName)</div><div class="ttdoc">End read of data chunk, ends with ')' return true or FatalIOError.</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8cpp_source.html#l00258">iIstream.cpp:258</a></div></div>
+<div class="ttc" id="apointFields_8hpp_html"><div class="ttname"><a href="pointFields_8hpp.html">pointFields.hpp</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_a922d2784284e8f6ee4009c3d92ba48b6"><div class="ttname"><a href="pFlowMacros_8hpp.html#a922d2784284e8f6ee4009c3d92ba48b6">FUNCTION_NAME</a></div><div class="ttdeci">#define FUNCTION_NAME</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00029">pFlowMacros.hpp:29</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aa3a14d3c76643399fc4edd8eca14944a"><div class="ttname"><a href="namespacepFlow.html#aa3a14d3c76643399fc4edd8eca14944a">pFlow::DefaultExecutionSpace</a></div><div class="ttdeci">Kokkos::DefaultExecutionSpace DefaultExecutionSpace</div><div class="ttdoc">Default execution space, it can be device exe.</div><div class="ttdef"><b>Definition:</b> <a href="KokkosTypes_8hpp_source.html#l00061">KokkosTypes.hpp:61</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a1084909fe2f0dbd8f2af68ab4e94692a"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a1084909fe2f0dbd8f2af68ab4e94692a">pFlow::AdamsBashforth4::add_vCtor</a></div><div class="ttdeci">add_vCtor(integration, AdamsBashforth4, word)</div><div class="ttdoc">Add a this to the virtual constructor table.</div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ac08dae7edcb5c5bb959fee5971fbad95">pFlow::token::SPACE</a></div><div class="ttdeci">@ SPACE</div><div class="ttdoc">Nul character.</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00086">token.hpp:86</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a7962c8cac5d82d0793dfeaba6c162f4d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a7962c8cac5d82d0793dfeaba6c162f4d">pFlow::AdamsBashforth4::TypeInfo</a></div><div class="ttdeci">TypeInfo(&quot;AdamsBashforth4&quot;)</div><div class="ttdoc">Type info.</div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a4e30df3927ef1cdd2490cd85018518f5"><div class="ttname"><a href="classpFlow_1_1integration.html#a4e30df3927ef1cdd2490cd85018518f5">pFlow::integration::baseName</a></div><div class="ttdeci">const word &amp; baseName() const</div><div class="ttdoc">Base name.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00122">integration.hpp:122</a></div></div>
+<div class="ttc" id="anamespacepFlow_html"><div class="ttname"><a href="namespacepFlow.html">pFlow</a></div><div class="ttdef"><b>Definition:</b> <a href="demGeometry_8hpp_source.html#l00027">demGeometry.hpp:27</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1IOstream_html_a367eb3425fc4e8270e2aa961df8ac8a5"><div class="ttname"><a href="classpFlow_1_1IOstream.html#a367eb3425fc4e8270e2aa961df8ac8a5">pFlow::IOstream::check</a></div><div class="ttdeci">virtual bool check(const char *operation) const</div><div class="ttdoc">Check IOstream status for given operation.</div><div class="ttdef"><b>Definition:</b> <a href="IOstream_8cpp_source.html#l00042">IOstream.cpp:42</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a8c3fff8fec7e5ef08cea578fed2e5fae"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a8c3fff8fec7e5ef08cea578fed2e5fae">pFlow::AdamsBashforth4::~AdamsBashforth4</a></div><div class="ttdeci">virtual ~AdamsBashforth4()=default</div><div class="ttdoc">Destructor.</div></div>
+<div class="ttc" id="aclasspFlow_1_1pointField_html"><div class="ttname"><a href="classpFlow_1_1pointField.html">pFlow::pointField</a></div><div class="ttdef"><b>Definition:</b> <a href="pointField_8hpp_source.html#l00033">pointField.hpp:33</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1pointStructure_html"><div class="ttname"><a href="classpFlow_1_1pointStructure.html">pFlow::pointStructure</a></div><div class="ttdef"><b>Definition:</b> <a href="pointStructure_8hpp_source.html#l00034">pointStructure.hpp:34</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1iIstream_html"><div class="ttname"><a href="classpFlow_1_1iIstream.html">pFlow::iIstream</a></div><div class="ttdoc">Interface class for any input stream</div><div class="ttdef"><b>Definition:</b> <a href="iIstream_8hpp_source.html#l00037">iIstream.hpp:37</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_ace46ff4fbe3c001c816dbc4f9f67606f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#ace46ff4fbe3c001c816dbc4f9f67606f">pFlow::AdamsBashforth4::rpIntegration</a></div><div class="ttdeci">Kokkos::RangePolicy&lt; DefaultExecutionSpace, Kokkos::Schedule&lt; Kokkos::Static &gt;, Kokkos::IndexType&lt; int32 &gt; &gt; rpIntegration</div><div class="ttdoc">Range policy for integration kernel.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00091">AdamsBashforth4.hpp:91</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_aae6ad039f09c0676db11bd114136a3fa"><div class="ttname"><a href="namespacepFlow.html#aae6ad039f09c0676db11bd114136a3fa">pFlow::int32</a></div><div class="ttdeci">int int32</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00050">builtinTypes.hpp:50</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_afb1938bc6cfc199cbd70f224040d4afc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#afb1938bc6cfc199cbd70f224040d4afc">pFlow::AdamsBashforth4::predict</a></div><div class="ttdeci">bool predict(real UNUSED(dt), realx3Vector_D &amp;UNUSED(y), realx3Vector_D &amp;UNUSED(dy)) override</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00049">AdamsBashforth4.cpp:49</a></div></div>
+<div class="ttc" id="astructpFlow_1_1AB4History_html_a8a588b9f1b4c4b66c2f3d025548fdd8e"><div class="ttname"><a href="structpFlow_1_1AB4History.html#a8a588b9f1b4c4b66c2f3d025548fdd8e">pFlow::AB4History::TypeInfoNV</a></div><div class="ttdeci">TypeInfoNV(&quot;AB4History&quot;)</div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_aceb0c803bb6e5c46a1695c4e5b6e641f"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#aceb0c803bb6e5c46a1695c4e5b6e641f">pFlow::AdamsBashforth4::needSetInitialVals</a></div><div class="ttdeci">bool needSetInitialVals() const override</div><div class="ttdoc">Check if the method requires any set initial vals.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00138">AdamsBashforth4.hpp:138</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a85ed561d066dae339196cd058783674f"><div class="ttname"><a href="namespacepFlow.html#a85ed561d066dae339196cd058783674f">pFlow::operator&gt;&gt;</a></div><div class="ttdeci">INLINE_FUNCTION iIstream &amp; operator&gt;&gt;(iIstream &amp;str, AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00041">AdamsBashforth3.hpp:41</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1token_html_a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24"><div class="ttname"><a href="classpFlow_1_1token.html#a4aba281d025f1d580c3835d67656fd31ab0421ccee09cdeadea4bc12e7f38be24">pFlow::token::END_LIST</a></div><div class="ttdeci">@ END_LIST</div><div class="ttdoc">Begin list [isseparator].</div><div class="ttdef"><b>Definition:</b> <a href="token_8hpp_source.html#l00092">token.hpp:92</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html">pFlow::AdamsBashforth4</a></div><div class="ttdoc">Fourth order Adams-Bashforth integration method for solving ODE.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8hpp_source.html#l00077">AdamsBashforth4.hpp:77</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a148d74ad0977268be8ea8b26a147f619"><div class="ttname"><a href="namespacepFlow.html#a148d74ad0977268be8ea8b26a147f619">pFlow::operator&lt;&lt;</a></div><div class="ttdeci">INLINE_FUNCTION iOstream &amp; operator&lt;&lt;(iOstream &amp;str, const AB3History &amp;ab3)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth3_8hpp_source.html#l00057">AdamsBashforth3.hpp:57</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html">pFlow::VectorSingle</a></div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8hpp_source.html#l00044">VectorSingle.hpp:44</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html_a10329e18307a60d3fdb203bcbed2b295"><div class="ttname"><a href="classpFlow_1_1integration.html#a10329e18307a60d3fdb203bcbed2b295">pFlow::integration::owner</a></div><div class="ttdeci">repository &amp; owner()</div><div class="ttdoc">Ref to the owner repository.</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00129">integration.hpp:129</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1VectorSingle_html_a51122b76468e0c5f19ea69c5c0ca6cf4"><div class="ttname"><a href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">pFlow::VectorSingle::deviceViewAll</a></div><div class="ttdeci">INLINE_FUNCTION_H auto &amp; deviceViewAll()</div><div class="ttdoc">Device view range [0,capcity)</div><div class="ttdef"><b>Definition:</b> <a href="VectorSingle_8cpp_source.html#l00249">VectorSingle.cpp:249</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth4_html_a69029aec4bfcd45b781d1cfc65359fcb"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth4.html#a69029aec4bfcd45b781d1cfc65359fcb">pFlow::AdamsBashforth4::AdamsBashforth4</a></div><div class="ttdeci">AdamsBashforth4(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdoc">Construct from components.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth4_8cpp_source.html#l00026">AdamsBashforth4.cpp:26</a></div></div>
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+<a href="AdamsBashforth5_8cpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">/*------------------------------- phasicFlow ---------------------------------</span></div>
+<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">      O        C enter of</span></div>
+<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">     O O       E ngineering and</span></div>
+<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">    O   O      M ultiscale modeling of</span></div>
+<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">   OOOOOOO     F luid flow       </span></div>
+<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">------------------------------------------------------------------------------</span></div>
+<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">  Copyright (C): www.cemf.ir</span></div>
+<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">  email: hamid.r.norouzi AT gmail.com</span></div>
+<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment">------------------------------------------------------------------------------  </span></div>
+<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment">Licence:</span></div>
+<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">  This file is part of phasicFlow code. It is a free software for simulating </span></div>
+<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">  granular and multiphase flows. You can redistribute it and/or modify it under</span></div>
+<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">  the terms of GNU General Public License v3 or any other later versions. </span></div>
+<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment"> </span></div>
+<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment">  phasicFlow is distributed to help others in their research in the field of </span></div>
+<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment">  granular and multiphase flows, but WITHOUT ANY WARRANTY; without even the</span></div>
+<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment">  implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.</span></div>
+<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment"></span> </div>
+<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment">-----------------------------------------------------------------------------*/</span></div>
+<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160; </div>
+<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="AdamsBashforth5_8hpp.html">AdamsBashforth5.hpp</a>&quot;</span></div>
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+<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160; </div>
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+<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<a class="code" href="classpFlow_1_1AdamsBashforth5.html#a129b1fb5fcc9dfcc9c803d8b13758cbc">pFlow::AdamsBashforth5::AdamsBashforth5</a></div>
+<div class="line"><a name="l00026"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth5.html#a129b1fb5fcc9dfcc9c803d8b13758cbc">   26</a></span>&#160;(</div>
+<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;    <span class="keyword">const</span> <a class="code" href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">word</a>&amp; <a class="code" href="namespacepFlow.html#a16a2137651b2c6b8ea4a8daf1d89ff61">baseName</a>,</div>
+<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;    <a class="code" href="classpFlow_1_1repository.html">repository</a>&amp; owner,</div>
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+<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;    history_(</div>
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+<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;                objectFile::WRITE_ALWAYS),</div>
+<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;            <a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>,</div>
+<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;            <a class="code" href="structpFlow_1_1AB5History.html">AB5History</a>({<a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>,<a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>, <a class="code" href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">zero3</a>})))</div>
+<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160; </div>
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+<div class="line"><a name="l00049"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth5.html#afb1938bc6cfc199cbd70f224040d4afc">   49</a></span>&#160;(</div>
+<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dt),</div>
+<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(y),</div>
+<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;    <a class="code" href="classpFlow_1_1VectorSingle.html">realx3Vector_D</a>&amp; <a class="code" href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a>(dy)</div>
+<div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;)</div>
+<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;{</div>
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+<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;}</div>
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+<div class="line"><a name="l00060"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth5.html#ac755e4bf02c3732d1eb89de9e903ebdb">   60</a></span>&#160;(</div>
+<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt,</div>
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+<div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;    <span class="keywordflow">if</span>(this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().allActive())</div>
+<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;    {</div>
+<div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;        <span class="keywordflow">return</span> intAll(dt, y, dy, this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().activeRange());</div>
+<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;    }</div>
+<div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160;    <span class="keywordflow">else</span></div>
+<div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160;    {</div>
+<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;        <span class="keywordflow">return</span> intRange(dt, y, dy, this-&gt;<a class="code" href="setPointStructure_8hpp.html#a385e32971df44b131e4498181a949a91">pStruct</a>().activePointsMaskD());</div>
+<div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160;    }</div>
+<div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160; </div>
+<div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;</div>
+<div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;}</div>
+<div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160; </div>
+<div class="line"><a name="l00079"></a><span class="lineno"><a class="line" href="classpFlow_1_1AdamsBashforth5.html#a8da2088458d635dfa1fbe1823a3bfd6d">   79</a></span>&#160;<span class="keywordtype">bool</span> <a class="code" href="classpFlow_1_1AdamsBashforth5.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth5::setInitialVals</a>(</div>
+<div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1indexContainer.html">int32IndexContainer</a>&amp; newIndices,</div>
+<div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;    <span class="keyword">const</span> <a class="code" href="classpFlow_1_1Vector.html">realx3Vector</a>&amp; y)</div>
+<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;{</div>
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+<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;}</div>
+<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160; </div>
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+<div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;    <a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a> dt, </div>
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+<div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;    <span class="keyword">auto</span> d_dy = dy.<a class="code" href="classpFlow_1_1VectorSingle.html#a51122b76468e0c5f19ea69c5c0ca6cf4">deviceViewAll</a>();</div>
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+<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;    <span class="keyword">auto</span> d_history = history_.deviceViewAll();</div>
+<div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160; </div>
+<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;    Kokkos::parallel_for(</div>
+<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;        <span class="stringliteral">&quot;AdamsBashforth5::correct&quot;</span>,</div>
+<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;        <a class="code" href="classpFlow_1_1AdamsBashforth5.html#ace46ff4fbe3c001c816dbc4f9f67606f">rpIntegration</a> (activeRng.first, activeRng.second),</div>
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+<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;            d_y[i] += dt*( </div>
+<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;                  <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(1901.0 / 720.0) * d_dy[i]</div>
+<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;                - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(2774.0 / 720.0) * d_history[i].dy1_ </div>
+<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;                + <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(2616.0 / 720.0) * d_history[i].dy2_</div>
+<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;                - <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>(1274.0 / 720.0) * d_history[i].dy3_</div>
+<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;                + <span class="keyword">static_cast&lt;</span><a class="code" href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">real</a><span class="keyword">&gt;</span>( 251.0 / 720.0) * d_history[i].dy4_</div>
+<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;                );</div>
+<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;            d_history[i] = {d_dy[i] ,d_history[i].dy1_, d_history[i].dy2_, d_history[i].dy3_};</div>
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+<div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160; </div>
+<div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;    <span class="keywordflow">return</span> <span class="keyword">true</span>;    </div>
+<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;}</div>
+</div><!-- fragment --></div><!-- contents -->
+</div><!-- doc-content -->
+<div class="ttc" id="anamespacepFlow_html_a6192191c0e9c178a44ee1ac350fde476"><div class="ttname"><a href="namespacepFlow.html#a6192191c0e9c178a44ee1ac350fde476">pFlow::real</a></div><div class="ttdeci">float real</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00045">builtinTypes.hpp:45</a></div></div>
+<div class="ttc" id="apFlowMacros_8hpp_html_a86d500a34c624c2cae56bc25a31b12f3"><div class="ttname"><a href="pFlowMacros_8hpp.html#a86d500a34c624c2cae56bc25a31b12f3">UNUSED</a></div><div class="ttdeci">#define UNUSED(x)</div><div class="ttdef"><b>Definition:</b> <a href="pFlowMacros_8hpp_source.html#l00035">pFlowMacros.hpp:35</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a129b1fb5fcc9dfcc9c803d8b13758cbc"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a129b1fb5fcc9dfcc9c803d8b13758cbc">pFlow::AdamsBashforth5::AdamsBashforth5</a></div><div class="ttdeci">AdamsBashforth5(const word &amp;baseName, repository &amp;owner, const pointStructure &amp;pStruct, const word &amp;method)</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00026">AdamsBashforth5.cpp:26</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1integration_html"><div class="ttname"><a href="classpFlow_1_1integration.html">pFlow::integration</a></div><div class="ttdoc">Base class for integrating the first order ODE (IVP)</div><div class="ttdef"><b>Definition:</b> <a href="integration_8hpp_source.html#l00051">integration.hpp:51</a></div></div>
+<div class="ttc" id="aclasspFlow_1_1AdamsBashforth5_html_a8da2088458d635dfa1fbe1823a3bfd6d"><div class="ttname"><a href="classpFlow_1_1AdamsBashforth5.html#a8da2088458d635dfa1fbe1823a3bfd6d">pFlow::AdamsBashforth5::setInitialVals</a></div><div class="ttdeci">bool setInitialVals(const int32IndexContainer &amp;newIndices, const realx3Vector &amp;y) override</div><div class="ttdoc">Set the initial values for new indices.</div><div class="ttdef"><b>Definition:</b> <a href="AdamsBashforth5_8cpp_source.html#l00079">AdamsBashforth5.cpp:79</a></div></div>
+<div class="ttc" id="aAdamsBashforth5_8hpp_html"><div class="ttname"><a href="AdamsBashforth5_8hpp.html">AdamsBashforth5.hpp</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a0ebe792a293e8c717bddf60070c0fe99"><div class="ttname"><a href="namespacepFlow.html#a0ebe792a293e8c717bddf60070c0fe99">pFlow::word</a></div><div class="ttdeci">std::string word</div><div class="ttdef"><b>Definition:</b> <a href="builtinTypes_8hpp_source.html#l00064">builtinTypes.hpp:64</a></div></div>
+<div class="ttc" id="anamespacepFlow_html_a477d522d35403bd985ae105bd759e9d1"><div class="ttname"><a href="namespacepFlow.html#a477d522d35403bd985ae105bd759e9d1">pFlow::zero3</a></div><div class="ttdeci">const realx3 zero3(0.0)</div><div class="ttdef"><b>Definition:</b> <a href="types_8hpp_source.html#l00137">types.hpp:137</a></div></div>
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